RNA id: XM_039794159.1


Basic Information

Item Value
RNA id XM_039794159.1
length 974
RNA type mRNA
GC content 0.47
exon number 7
gene id anp32a
representative False

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 16546026 ~ 16551698 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCAATCCCGAGACGTGCTCCCGCCCACCGAGCGGATCAAGTTTGAATGAACAACAGCAGGCTGTTCTAGAGGTGGTATAGTTGCATTTGCAGTAATTATTAAAAGTGTGTATCGTATCGCGGGGTGCGCTGATCAAGGATGGACATGAAGAAAAGAATTCATCTAGAGTTGCGAAACCGCACTCCATCAGATGTAAAAGAACTCGTTTTAGACAACTGTCGCTCAAATGAAGGAAAGATCGAGGGTCTAACAGATGAATTTGAGGAGCTGGAATTTCTAAGCACAATCAATGTTGGACTGACGACAGTTGCCCACTTGCCGAAGCTAAATAAACTCAAAAAGCTTGAACTCAGCGATAACAGGATCTCAGGAGGGTTGGACGTTCTGGCAGCGAAATGCCCCAACCTCACACATCTCAACCTCAGTGGCAACAAGATTAAAGACCTCAGCACAATAGAACCATTGAAAGAATTGGGGACCCTGAAAAGCCTAGATCTGTTTAACTGTGAAGTAACAAACCTGAACGAATACAGAGACAACGTATTCAAGCTACTACCCCAGCTCACGTACCTGGACGGGTACGACAAAGACGACAAAGAGGCACCAGATTCCGACGCTGAGGTTTACGCAGAGGGTTTGGATGACGACGAGGAAGATGAAGACGATGAGGAGGAGTATGACGAAGATGCAGCACCaggagacgaggaggaggaggagggagaggaggaggaagaggagaatgaagaggaggaagaggaggacctAAGTGGAGAGgaggaagaggaggaagatctGAATGACAAGGAGGTTGACGATGAGGATGATGAAGAAGAAGAACGAGGTCAGAAGAGAAAAAGGGAACTGGAtgaagaaggggaggaggatgAAGACGATTGAGAGTCCTCTTGAAGCTAAGTTGTGAACTGTTTTAAACTTGTATCTCCCAGTCACTTCCCAACAACCCCATGTATTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36913 lncRNA downstream 137210 16409470 ~ 16409936 (-) True G27729
TU36911 lncRNA downstream 138583 16405812 ~ 16408563 (-) False LOC120555730
TU36909 lncRNA downstream 159974 16386896 ~ 16387172 (-) True G27725
TU36904 lncRNA downstream 222955 16321963 ~ 16324191 (-) False LOC120555730
TU36877 lncRNA downstream 378725 16166959 ~ 16168421 (-) True G27698
TU36956 lncRNA upstream 5836 16557533 ~ 16558521 (-) True G27767
TU36957 lncRNA upstream 6941 16558638 ~ 16559005 (-) True G27768
TU36964 lncRNA upstream 87220 16638917 ~ 16642809 (-) True G27775
TU37069 lncRNA upstream 470224 17021921 ~ 17121580 (-) True G27865
TU37076 lncRNA upstream 644083 17195780 ~ 17284509 (-) False LOC120556401
XM_039794152.1 mRNA downstream 54503 16419863 ~ 16492643 (-) True itga11a
XM_039794151.1 mRNA downstream 54702 16419863 ~ 16492444 (-) False itga11a
XM_039794150.1 mRNA downstream 77597 16419863 ~ 16469549 (-) False itga11a
XM_039794737.1 mRNA downstream 138278 16323337 ~ 16408868 (-) True LOC120555730
XM_039795567.1 mRNA downstream 253086 16260894 ~ 16294060 (-) True LOC120556157
XM_039794783.1 mRNA upstream 397944 16949641 ~ 16983198 (-) False LOC120555746
XM_039794782.1 mRNA upstream 397944 16949641 ~ 16983198 (-) False LOC120555746
XM_039794776.1 mRNA upstream 397944 16949641 ~ 16983198 (-) False LOC120555746
XM_039794777.1 mRNA upstream 397944 16949641 ~ 16983198 (-) False LOC120555746
XM_039794775.1 mRNA upstream 397944 16949641 ~ 16983198 (-) False LOC120555746
XR_005638870.1 other downstream 907186 15639769 ~ 15639960 (-) True LOC120556584
TU36517 other downstream 1703241 14842713 ~ 14843905 (-) True G27420
TU36388 other downstream 2076801 14469758 ~ 14470345 (-) True G27321
XR_005638877.1 other downstream 3257882 13289210 ~ 13289264 (-) True LOC120556590
TU36095 other downstream 3451380 13069996 ~ 13095766 (-) True G27075
TU37150 other upstream 956426 17508123 ~ 17513168 (-) False G27925
TU37147 other upstream 958253 17509950 ~ 17513168 (-) False G27925
TU37149 other upstream 958431 17510128 ~ 17513168 (-) True G27925
TU37410 other upstream 1666425 18218122 ~ 18220550 (-) True G28121
TU37599 other upstream 1831008 18382705 ~ 18383642 (-) True G28265

Expression Profile