Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039794271.1 |
| length | 1433 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 9 |
| gene id | gtf2f2a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053114.1 |
| NCBI id | CM020911.1 |
| chromosome length | 46923577 |
| location | 19500529 ~ 19508532 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006367 | transcription initiation from RNA polymerase II promoter | biological_process |
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0005674 | transcription factor TFIIF complex | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| id | description |
|---|---|
| K03139 | TFIIF2, GTF2F2, TFG2; transcription initiation factor TFIIF subunit beta |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU37984 | lncRNA | downstream | 64816 | 19434943 ~ 19435713 (-) | False | G28558 |
| TU37983 | lncRNA | downstream | 65314 | 19420548 ~ 19435215 (-) | True | G28558 |
| TU37981 | lncRNA | downstream | 82094 | 19417412 ~ 19418435 (-) | True | G28557 |
| TU37975 | lncRNA | downstream | 91027 | 19351997 ~ 19409502 (-) | True | G28552 |
| TU37963 | lncRNA | downstream | 169014 | 19330490 ~ 19331515 (-) | True | G28545 |
| TU38063 | lncRNA | upstream | 21040 | 19529572 ~ 19531634 (-) | True | G28623 |
| TU38073 | lncRNA | upstream | 41595 | 19550127 ~ 19551890 (-) | True | G28632 |
| TU38083 | lncRNA | upstream | 49146 | 19557678 ~ 19559314 (-) | True | G28637 |
| XR_005638844.1 | lncRNA | upstream | 65787 | 19574319 ~ 19600624 (-) | True | LOC120556360 |
| TU38116 | lncRNA | upstream | 415203 | 19923735 ~ 19923998 (-) | True | G28670 |
| XM_039794265.1 | mRNA | downstream | 5116 | 19459171 ~ 19495413 (-) | True | LOC120555523 |
| XM_039794294.1 | mRNA | downstream | 142162 | 19343424 ~ 19358367 (-) | False | marchf7 |
| XM_039794290.1 | mRNA | downstream | 142162 | 19343424 ~ 19358367 (-) | False | marchf7 |
| XM_039794293.1 | mRNA | downstream | 142377 | 19343424 ~ 19358152 (-) | True | marchf7 |
| XM_039796053.1 | mRNA | downstream | 267689 | 19227639 ~ 19232840 (-) | True | psmd14 |
| XM_039796201.1 | mRNA | upstream | 153 | 19508685 ~ 19511713 (-) | True | gpalpp1 |
| XM_039796124.1 | mRNA | upstream | 745181 | 20253713 ~ 20279186 (-) | True | LOC120556479 |
| XM_039795473.1 | mRNA | upstream | 967095 | 20475627 ~ 20497725 (-) | False | tdrd3 |
| XM_039795472.1 | mRNA | upstream | 967095 | 20475627 ~ 20497725 (-) | False | tdrd3 |
| XM_039795474.1 | mRNA | upstream | 967095 | 20475627 ~ 20497725 (-) | True | tdrd3 |
| TU37839 | other | downstream | 374153 | 19123566 ~ 19126376 (-) | True | LOC120555836 |
| TU37840 | other | downstream | 374153 | 19123566 ~ 19126376 (-) | False | LOC120555836 |
| TU37831 | other | downstream | 438379 | 19059755 ~ 19062150 (-) | False | LOC120555695 |
| TU37697 | other | downstream | 780510 | 18719372 ~ 18720019 (-) | True | G28345 |
| TU37603 | other | downstream | 1080030 | 18417978 ~ 18420499 (-) | True | G28269 |
| TU38446 | other | upstream | 2072510 | 21581042 ~ 21583498 (-) | True | G28933 |
| TU38813 | other | upstream | 3369099 | 22877631 ~ 22889042 (-) | True | G29209 |
| TU38861 | other | upstream | 3407322 | 22915854 ~ 22919554 (-) | False | dpep1 |
| TU38988 | other | upstream | 3791010 | 23299542 ~ 23310746 (-) | False | spi1b |
| TU39182 | other | upstream | 4404823 | 23913355 ~ 23958933 (-) | False | apba2b |
