RNA id: TCONS_00073510



Basic Information


Item Value
RNA id TCONS_00073510
length 855
RNA type processed_transcript
GC content 0.40
exon number 2
gene id XLOC_037359
representative True

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 40895649 ~ 40897183 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


aaaaatgggagtttccatttgggcacgcgctgattttcaccgaggcaaaacaaacacacacacaggggagaaagacagtgactgtgtttaatgacggtggaatgtttgatactgcacgtcgcttaagagaaaaaatctctgcatttctctgtaaaaagccatgtgtgtatagactatccggtcacaaaatgcgacgAAAATAAACACGACGGTCTGTaatagtttgcttgcagtgttcaCATGTTCACActtggagagcagcatttacagcaaatctttcagtccataatattgtagtgatgttaacgtaaactaagtaacttagaaatcatttgactaaggtctgtctttaaacactgaaagagtactgctgacgatacgaactataactttgccatatgaatgaacaaagaaagggcactgatcgcacgcacttaccaaatctgtagagacaggacaatcaacaccatcTGGAGccgtgtcttttttaaaaggagacaagcagcaaatccggatttcaccatttccagatgagaaaagctcttgaGTAAAAAATGTTCTGTACAAACATATTTCTGCCGCGTGTCGTGTGCACTGATCCACACATGAGTCCAGTTGCGCTCTCATAGctggagaatgaaaacaaaaccttcgttgcagcacattataaacaataataataataaagttttttattCCTTCCCCACTTCTTTTGGCAACATAACGTGGCGTCCCTGTtgctgaacactgtttcaggtacaaacagtcttcgaagcttgtatgcatattaatgaagttgctcgCATACAGAgctcgctgattggtttgaaacaagtcttactcatgaatgaatgc

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000147604

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00074931 lncRNA upstream 1030099 39863253 ~ 39865672 (+) True XLOC_037353
TCONS_00073476 lncRNA upstream 2277440 38615603 ~ 38618331 (+) True XLOC_037344
TCONS_00073469 lncRNA upstream 2424964 38470041 ~ 38470807 (+) False XLOC_037341
TCONS_00073463 lncRNA upstream 2474735 38420012 ~ 38421036 (+) False XLOC_037338
TCONS_00073462 lncRNA upstream 2477660 38412748 ~ 38418111 (+) True XLOC_037337
TCONS_00073518 lncRNA downstream 182911 41080094 ~ 41083181 (+) False XLOC_037363
TCONS_00073517 lncRNA downstream 182911 41080094 ~ 41083181 (+) True XLOC_037363
TCONS_00073527 lncRNA downstream 341058 41238241 ~ 41240872 (+) False XLOC_037366
TCONS_00075179 lncRNA downstream 341058 41238241 ~ 41246508 (+) False XLOC_037366
TCONS_00073528 lncRNA downstream 343585 41240768 ~ 41246508 (+) True XLOC_037366
TCONS_00073507 mRNA upstream 69782 40825065 ~ 40825989 (+) True XLOC_037357
TCONS_00073506 mRNA upstream 278389 40546677 ~ 40617382 (+) True XLOC_037356
TCONS_00073503 mRNA upstream 1757267 39027312 ~ 39138504 (+) True XLOC_037352
TCONS_00073502 mRNA upstream 1758926 39027312 ~ 39136845 (+) False XLOC_037352
TCONS_00073501 mRNA upstream 1759006 39027123 ~ 39136765 (+) False XLOC_037352
TCONS_00073511 mRNA downstream 42153 40939336 ~ 40943137 (+) True XLOC_037360
TCONS_00073512 mRNA downstream 127790 41024973 ~ 41034174 (+) False XLOC_037361
TCONS_00073513 mRNA downstream 127842 41025025 ~ 41030600 (+) True XLOC_037361
TCONS_00073514 mRNA downstream 143111 41040294 ~ 41045873 (+) True XLOC_037362
TCONS_00073515 mRNA downstream 182846 41080029 ~ 41082581 (+) False XLOC_037363
TCONS_00073505 other upstream 617508 40278147 ~ 40278263 (+) True XLOC_037355
TCONS_00073504 other upstream 758159 40137497 ~ 40137612 (+) True XLOC_037354
TCONS_00073498 other upstream 1881173 39010445 ~ 39014598 (+) False XLOC_037351
TCONS_00073499 other upstream 1882336 39011226 ~ 39013435 (+) True XLOC_037351
TCONS_00073497 other upstream 1884387 39010432 ~ 39011384 (+) False XLOC_037351
TCONS_00073529 other downstream 352274 41249457 ~ 41266843 (+) True XLOC_037367
TCONS_00073536 other downstream 696313 41593496 ~ 41593610 (+) True XLOC_037370
TCONS_00073538 other downstream 785743 41682926 ~ 41683010 (+) True XLOC_037372
TCONS_00073540 other downstream 836350 41733533 ~ 41733610 (+) True XLOC_037374
TCONS_00073545 other downstream 1092903 41990086 ~ 42038319 (+) True XLOC_037377

Expression Profile


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