RNA id: TCONS_00073529


Basic Information

Item Value
RNA id TCONS_00073529
length 1454
RNA type unprocessed_pseudogene
GC content 0.44
exon number 13
gene id XLOC_037367
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 41249457 ~ 41266843 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCTTTATATTTTCTACAGAGTCTGAAACAAAATGTCAGACACCAAAAGAGATGAAACTTGAGGAAGCTGAACAAATGTTTACAGGAGGACTAAATATAAAAGGAGAGGTGGTAATGAAAGATATTGCTAATGCACTGACATTAGCAGAGCAGATTCAGATCACACTGATATCAGAGGAGTTACCCGAGTAGAAGAAGAGACAGCAGATGGCTTGTATTGGTGGTCCACATAACACTGGTCTGGATCAGCTTCAGAACTGGTTCACGGTGGTCTCAGAGTGTCTCCTGCAGATCCGTCAGCAGCTGAAGAAAGTTCAGGAACTGGTCCAGAAATTCACCTACAGCAACGACTCACTAAATCTAGGATGGGGCCAGCTGGATGAACAGGCCATTTCACTCTTcaaaaatctcatattaaaTTCTCTTGTGGTGGAGAGGCAGCCCTGTATGCCAATGTATCCTCAGAGACCCTTGCTAATTAAAACAGGAGTTCAGTTCACCGTCAAGATCAGATTGCTAGTCAAACTCCCAGAACTTAACTATCAACCCAAAGCAAACGTTTCTGTTGacaaATTTAGACAATTCTTTATATTAGGGACTAATCGTAAATGCATGACCTTGGATGAATCTAGTGGATGCCTCGCAGCTTCTTTTCCTCATATGCCACCTTTCCTTTTTTATGAAGAGCTGCACTTAATCTGCTTTGACACACAGCTGATTCTGCCTGACCTGTGCATTGACTTATCGATCACAAGTCTTCCTGTGTCGATTATGACACCTTTACTCAGGAGTATTTCTTATGCCTGGTGCTCCATCTTATGGTACAACATGCTCAGCAGTGAACCACATAATCTGACGTTCTTCTTGAATCCGCCACCGGTGAAATGGGATCAGCTTTCAAAGGTCATAAGCTGGCAGTTTTCTTCAATCAGCAAACGAGCGCTGACCTCAGATCAGCTGAGAACACTGGCCGACAAACTTCTTGGTCACGAAGCTCAAGGGGACCCTGAGAGACTTGTCCAGCACGGTACATTTTTTAAGGCAACTGTTGAGCAAGGTGGTTCCCTCTGGCATTGGATATATGGACATCtggaatttgtaaaaaaatatgtgcTCAACATCTGGAATGATGGATATATTATGGGGTTTCTGAGTCAGGAGAGAGCAGAGGCTCTGCTGAGAGACAAAGCTCCAGGCACTTTCCTTCTGCGCTTTAGTGAAAGCTGTCGAGACGGAGGAATCATCATCACATGGGTGGAGGAGTCGCAGGAAGGTGAACCTGTGCTACATTCGACAGAGCCCtacaataatgcaaaaataaacacaAGCTCCATGCCCCAAATCATCCGTGATTTCACCGCTGGAGAAAAGCATCCTGTGAATCCCCTCATCTACCTTTACCCAGACATCCCAAGAGATGTCGCCTTTGGCCGATACTATACCAGTGAATCTTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000136821

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00075179 lncRNA upstream 2949 41238241 ~ 41246508 (+) False XLOC_037366
TCONS_00073528 lncRNA upstream 2949 41240768 ~ 41246508 (+) True XLOC_037366
TCONS_00073527 lncRNA upstream 8585 41238241 ~ 41240872 (+) False XLOC_037366
TCONS_00073518 lncRNA upstream 166276 41080094 ~ 41083181 (+) False XLOC_037363
TCONS_00073517 lncRNA upstream 166276 41080094 ~ 41083181 (+) True XLOC_037363
TCONS_00073533 lncRNA downstream 208099 41474942 ~ 41479386 (+) True XLOC_037368
TCONS_00073534 lncRNA downstream 243105 41509948 ~ 41579002 (+) False XLOC_037369
TCONS_00073535 lncRNA downstream 243105 41509948 ~ 41598827 (+) True XLOC_037369
TCONS_00073541 lncRNA downstream 521374 41788217 ~ 41806355 (+) True XLOC_037375
TCONS_00075180 lncRNA downstream 835358 42102201 ~ 42108086 (+) True XLOC_037379
TCONS_00073524 mRNA upstream 2260 41218967 ~ 41247197 (+) False XLOC_037366
TCONS_00073525 mRNA upstream 2268 41218974 ~ 41247189 (+) False XLOC_037366
TCONS_00073526 mRNA upstream 21887 41224100 ~ 41227570 (+) False XLOC_037366
TCONS_00073521 mRNA upstream 41114 41156287 ~ 41208343 (+) False XLOC_037365
TCONS_00073520 mRNA upstream 41114 41156287 ~ 41208343 (+) False XLOC_037365
TCONS_00073530 mRNA downstream 192916 41459759 ~ 41470408 (+) False XLOC_037368
TCONS_00073531 mRNA downstream 192929 41459772 ~ 41479522 (+) False XLOC_037368
TCONS_00073532 mRNA downstream 207780 41474623 ~ 41481650 (+) False XLOC_037368
TCONS_00073537 mRNA downstream 345799 41612642 ~ 41681053 (+) True XLOC_037371
TCONS_00073539 mRNA downstream 423310 41690153 ~ 41741420 (+) True XLOC_037373
TCONS_00073510 other upstream 352274 40895771 ~ 40897183 (+) True XLOC_037359
TCONS_00073509 other upstream 352645 40895649 ~ 40896812 (+) False XLOC_037359
TCONS_00073505 other upstream 971194 40278147 ~ 40278263 (+) True XLOC_037355
TCONS_00073504 other upstream 1111845 40137497 ~ 40137612 (+) True XLOC_037354
TCONS_00073498 other upstream 2234859 39010445 ~ 39014598 (+) False XLOC_037351
TCONS_00073536 other downstream 326653 41593496 ~ 41593610 (+) True XLOC_037370
TCONS_00073538 other downstream 416083 41682926 ~ 41683010 (+) True XLOC_037372
TCONS_00073540 other downstream 466690 41733533 ~ 41733610 (+) True XLOC_037374
TCONS_00073545 other downstream 723243 41990086 ~ 42038319 (+) True XLOC_037377
TCONS_00073546 other downstream 773714 42040557 ~ 42095177 (+) False XLOC_037378

Expression Profile

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