RNA id: XM_039795198.1


Basic Information

Item Value
RNA id XM_039795198.1
length 3910
RNA type mRNA
GC content 0.50
exon number 5
gene id znf710b
representative False

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 33436811 ~ 33471335 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTTGTGGCGTTGAGGAGGAGCTCAGTTGTTTATTCATTCACGTCAGCCCCTCTCGCcttcccttccctccttcctGCTACACACAACGGGGACCCACCGTTGTAACTGTTTTTCCCATATTGAAATTAACCACAATCACGCCGCCACCATAAACCGATTTTGGAATCAGGAGGAGGCGAGCCGGCGCCTGGGTAGATGTGAGCCCAAGGTAATGGCCAGGCTGGTGGACataggcacacagacagaccccGTAGTCGTGCTGTCCCTGGCCCAGGCCGCCGTGCTAGGTCTCATCTCCCAGAATGAAGTGTTCGGCGCTACCATTGCACCCAACGGCTTCTACACCGGCGAACCCAAAGAGTCCCCCGCACCACCAGTAGACGGCGTCGACTACGAGTACGCAGACCAGCTTATCGGAGCCAACGGAGATTATCTGGGAGACAACTTGGGAGAAGACGGACAGATGCAACCCAGCTGCAGTCAGAGGAGGTGGCAGCAGGGGCCCCCTCAACATCCGGATGCGAAAATGGTGGGCCCCGATCGCCACAGCCTTCAAGGCGGTGACGTGTCCTCATCCCATGTGTCCTCTTCCCATGTGAAAGGAGAAGTGGTGAACTCTGCAATGTCCTCCTGTGTCCACATGCTTAACAATCTGGCTACCAGAGGTGGTTTGGTACAGGTGGATCCAGCCACCCTCAGAGGCGCCAACAAGAACTGTGTAGAGTGTGAGCGGGAAGCATCCAACCAGCCGCAAGCCAACACACACGGtcaccctcctcccccccagGTGAGCCACAGAGGAGGGGAGCAGGGCCACAGAGGACTGCAGAGCCAGCGCCCTATGGGGGGCCACGGTCGAGGTGGCAGAGAGGACGAAGAAGAGGTAGAACACCAGGGGAACAACATGATGAAGCCCACCCAGCAGGACGAAGCCATCAGCAGCTACTTCCAGACCAGCGAAGTGGGCAGCTATGATTCGGCCGAAATGGGCATGGCGGGCGAGTACGAAGACGGAAGCCAGAACATGATGTGGACGGATGGGAACGCAGGAGCGCAGCATCAGCAGCCTCCACACCCCCAGCCTCCTCGTCGCCACGGCGGCCGCAGAGTGGACCGGCTAGATATCAATATCCAGATCGATGAATCTTACTGCGTGGATGTGGGAGATGGTCTGAAGCGCTGGAAGTGCCGCATGTGTGATAAATCGTACACCTCCAAATACAACTTGGTCACGCACATCCTGGGCCACAATGGCATCAAGCCACACGCCTGTCCACATTGCGGGAAGCTCTTCAAGCAGCCCAGTCATCTTCAAACGCACCTGCTGACCCACCAAGGCACGCGTCCCCACAAATGCACCGTCTGCAAGAAGGGCTTCACCCAGACCAGCCACCTGAAGCGACACATGCTCCAACACACTGACGTCAAGCCCTACAGCTGCCGCTTCTGCCGCCGCGGCTTTGCTTATCCCAGCGAGCTGCGAGCGCACGAGGTGAAGCACGAGCGCGGACGTTGTCATGTCTGCTCTCAGTGTGGCATGGAGTTCCCCACCTACGCCCACCTCAAACGCCACCAAACCAGCCACCAGGGCCCCCACACCTTCCAGTGCACGGAGTGCAACAAGTCGTTCGCCTACCGTAGCCAGCTCCAGAACCACCTGCTGAAGCACCAGAGCCCGAGGCCTTACACCTGCTCCCAGTGCGGCCTGGAGTTTGTGCAGCTCCACCACTTACGTCAGCACTCGCTCACTCATAAGGGGATGAAAGGCCACAAGTGTGACGTGTGTTCCCGGGAGTTCACCCTGTCCGCCAACCTGAAGAGGCACATGCTGATCCACAACAGCGTCAGACCCTTCCAGTGTCACGTCTGCTTCAAGAGCTTCATCCAGAAACAGACCCTTAAGACCCACATGATCGTCCACCTGCCTGTGAAGCCATTCAAATGCAAGgtatGTGGCAAGTCTTTCAACAGAATGTACAACCTGCTGGGCCACATGCATCTCCATGCTGGCAGTAAGCCCTTCAAGTGTCCCTACTGCACCAGTAAGTTCAACCTGAAGGGAAACCTCAGCAGGCACATGAAAGTCAAGCACGGCATGGACGTCTCACCAGAAGGACAAGACGTTCTTCCAGAAATGGATAGCCAGGGGGAGTATGAAGGACAGAACTTCAGCTTTACCTCACCAGACAATATGGACAATGGTGGCTCCCAAAACCTCACTAAACTCACTACAGCAAACatggaggacatggaggagTATTACAATTTCGGGAAGGATACAAGCAGCTACACTACACCTTGAGTGGTGATAAACTGATGAAcatgttatgtttttgtttttgtctttttgaagaCCGAAAGACATTACAGAGTTGTTGTCAAGGCTTTGGGAGACACTGGGGACAGGGATTGTTTTAGTTTTGGCCTCCTTCCAGAAGAGCCAGAACTGATGGACTCTGATTGGGAGGCCAGGAAGGAGACGCACTTCAAGGGACACCTTTCAATTCTGTTGCTGTGGCAGAGACACTGAAACTGCCGACGCTGGTCTGAAGCTCATTCTTTTTGGGATTACTGCGCTTACCGTCTCAAAGACTCTCACTGGCAGACAGTCAAatctgtatgttgtgtgtatgtatcagttatttgaagaagaaaaaaagaaaagaaaagttgcAGAGCCATCAGTTACATTTGATGTGATAGAAATTTGTTTACCATTTTTGCCATGTTTTTTGTCATCCACAACCAATGTATGCCCTTATATTTTTGACTGAAAGTGCCAGCTAGATACATTTGCAACTAAGCTTCCACCATGTCAGCTATTTACTCACTGTATATTGAACTTTTGATACATAGTCACAACATATTCATAGGTTTGAATGCTCTTACTAAACAGTTCCTAATTGTAGTTACCCATTCCTGCCCAGCCCTCCTTTTAAACAGGCCGCTCTTTCAATGCGTGTGTGCTTTCTGCACAGGACATTGTAGCCTTTTTCTTGCCAGGGCACTTGCTACCAAAGTTGCTACTGTCTCATGTCGGCTGATAAGCAGAAAACAATGTTACCGACATGTAAATCCCTGCCACTGTACAAATGATCCTGCAACATGCAGTGTGTTTACACACCGTTTTTGTCTCACATGGTTTAGCTTTACATTAATATTCTATCCCGTGTAGTGAATATACTGCTCAAAGTTTTTGAATTACAGAGTGAACAATAcaaagcacttttttttcttttttttttattgagaccTGTCATTTTTCTGTGAAGGCTGTCTCCAGCAAGAGTGAACTCATTTGCCTCAAGGAGAAGAGCTGGGGGAAATAAGATCTTATAATCTTCCAAACCCCCATAACGGcaatattaataaacacaaacagataTGCTTTCTCAGTAGTTTCTTTTTTGTAAACTGCAGTTTCCTTGAAATGGATATTTCACAGTTGTCAGTTTAAATGTGAATTGAAGAATGAGCAGTTTGGATGGAGAATCAGCAGTTtgggttttttgtttgtttgtagttTCAGCAATCTTAAATCCAGGGCTGTTTTCACTTCACTTTCAATTCACTTAATTCAGAAAGATATTTCCCCTCTCAATGGGGGGAAAAACACTGAGAGTGGCTATCACATCCAGTCTAGAtttaaaagaagagaaaatTATTTGGTGGCCCAGGTTACATTTTGTATGATTGAATTGAAAGTGGACTGACACTAGTCCTGTTATTCATAATTCTGTTTTGGGGAAgacagtcagctccccctgtcCTGCCATGCAGGTCAGCCTTGATATGCACACTAAACCAGAGGAACCGTCTGCTAGTTCTTCTTTGAGATGAGGAATATCAAACTGAGACCTCATGGAAATTGACCATGACTTATTTAATAAAGGTTCTCTAGTTTAAATGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU42127 lncRNA downstream 101406 33333954 ~ 33335405 (-) True G31707
TU42126 lncRNA downstream 102873 33333098 ~ 33333938 (-) True G31706
TU42125 lncRNA downstream 103792 33329613 ~ 33333019 (-) True G31705
TU42124 lncRNA downstream 171136 33265318 ~ 33265675 (-) True G31704
TU42052 lncRNA downstream 339833 33095621 ~ 33096978 (-) False LOC120556104
TU42221 lncRNA upstream 95091 33566426 ~ 33569379 (-) False serf2
TU42292 lncRNA upstream 242965 33714300 ~ 33715276 (-) True G31820
TU42296 lncRNA upstream 245384 33716719 ~ 33718580 (-) True G31822
TU42348 lncRNA upstream 384563 33855898 ~ 33856166 (-) True G31862
TU42371 lncRNA upstream 708570 34179905 ~ 34180494 (-) True G31881
XM_039795565.1 mRNA downstream 17908 33412665 ~ 33418903 (-) True si:ch211-107o10.3
XM_039795561.1 mRNA downstream 46500 33362812 ~ 33390311 (-) True LOC120556151
XM_039795563.1 mRNA downstream 54796 33362814 ~ 33382015 (-) False LOC120556151
XM_039795562.1 mRNA downstream 54855 33362815 ~ 33381956 (-) False LOC120556151
XM_039795564.1 mRNA downstream 76505 33353861 ~ 33360306 (-) True LOC120556152
XM_039794933.1 mRNA upstream 95036 33566371 ~ 33569375 (-) True serf2
XM_039794005.1 mRNA upstream 158728 33630063 ~ 33635491 (-) True LOC120555331
XM_039796200.1 mRNA upstream 252526 33723861 ~ 33728257 (-) True bcl2l10
XM_039794315.1 mRNA upstream 259799 33731134 ~ 33744672 (-) True gnb5b
XM_039794321.1 mRNA upstream 273808 33745143 ~ 33806294 (-) True myo5aa
TU42136 other downstream 88721 33342247 ~ 33348090 (-) True wdr76
TU41994 other downstream 542406 32891499 ~ 32894405 (-) True G31602
TU41279 other downstream 2904695 30530751 ~ 30532116 (-) False fam120b
XR_005638738.1 other downstream 3975575 29402754 ~ 29461236 (-) False elp4
TU40901 other downstream 4167647 29257978 ~ 29269164 (-) False LOC120555471
TU42326 other upstream 335601 33806936 ~ 33816370 (-) False LOC120555494
TU42327 other upstream 335601 33806936 ~ 33816370 (-) False LOC120555494
TU42453 other upstream 1019325 34490660 ~ 34599541 (-) True G31955
TU43972 other upstream 7177341 40648676 ~ 40662621 (-) True G33122
TU44387 other upstream 8286456 41757791 ~ 41764896 (-) True sirt3

Expression Profile