RNA id: XM_039795363.1


Basic Information

Item Value
RNA id XM_039795363.1
length 3382
RNA type mRNA
GC content 0.45
exon number 11
gene id slc7a10a
representative True

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1789953 ~ 1817994 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TAAGATATTAAGGGCAGCCCGGGGAGTGGAGCTTGGTTCAGTCTACAGTATCTGGACCGGACCGAGGCGGGCAGAACGTATATATCTGTAAGGCGGAGGAGATGGAGgacaaagagaagaagaagaaggataaGAACTCCTCCAAGAACGACAGAGTCACTCTGAAAAAAGAAATTGGACTTTTGAGCGCTTGCGCTATTATCATCGGAAACATCATTGGCTCTGGAATATTCATCTCACCTAAAGGAGTGTTGGAGCATGCAGGCTCTGTGGGGCTGTCCCTTATCGTCTGGGTTTGTGGAGGGGGGATCTGTGCCCTTGGGTCCCTGTGCTACGCTGAACTGGGTGTCACCATCCCAAAGTCTGGAGGAGACTATTCATACGTGACAGAAATCTTTGGAGGGCTAGTGGGCTTCCTGTTGTTATGGAGTGCCGTCCTCATCATGTATCCGACCACGCTTGCTGTCATCGCGCTCACCTTTTCCAATTACGTCTTGCAGCCTGCCTTCCAGAACTGCCTGCCTCCGTTCATCGCCACCAGACTCCTCGCCACCATCTGTATCTTATTCCTGACCTGGGTGAACTGCTCAAGTGTGCGCTGGGCGACAAGGATCCAGGATGTTTTCACTGTAGGAAAACTGCTCGCTCTAGTACTCATCATAGTGGTAGGACTCGTCCAAATCTGTagagGTCACTACGATGCCCTACGGCCCAGTGTGGCGTTTGAATTCAGTCAGGATCCCTCTGTGGGACAGATAGCGCTGGCCTTCCTTCAGGCCTCCTTTGCCTACAGCGGATGGAATTTCCTCAACTATGTTACAGAGGAGATTGTGGAGCCACGCAAgaACCTCCCCCGTGCCATCTACATTTCCATCCCACTGGTGACCCTTGTCTACACTATGACCAACATTGCCTACTTTTCCTCCATGACCCCTGAGGAGCTGCTGGCCTCCAACGCTGTGGCAGTGACATTCGGCGAAAAGCTGCTGGGGATGTTTTCCTGGGTGATGCCGATCTCTGTAGCGCTGTCCACCTTTGGAGGAATCAACGGATATCTGTTCACCTCCTCCAGATTGTGTTTCTCTGGAGCCAGAGAGGGTCACCTGCCCTATCTGCTGGCTATGATCCACTTAAAGAACTGCACTCCAATCCCTGCCCTGCTGGTCTGCTGCATGGCCACCATAGTCATCCTGTGCATTGGAGAGACACACAACCTGATCAACTATGTGTCCTTTATCAACTATCTGTCCTATGGGGTAACCATTGCTGGCCTTCTCTACCTCCGCAAGAAGAGACCAAACCTGGTCAGACCCATCAAGGTAAGCATGTTGATCCCCATCACCTACTTGATATTCTGGGCTGTGCTGCTGGGCTTCAGTCTGTATTCTGAACCAGTGGTTTGTGGCCTGGGAATGGTCATCATGCTGACTGGAGTCCCTGTATACTTTGTGGGTGTTCAGTGGAAGAACAAACCCAAATGTGTAGACATGCTAGTCGAAAGAGTCACGTACATGGGCCAGAAGGTGTGTTATGTGGTGTTTCCTCAGGAAGACCCTTCAGAGACTGAACCCCTCACTGCCTCCAAAGCCATTGACTGAGCAGGGCAGTCAACCAGGAATTCCCTTTTTACATCAACACCTGCACTTCCAGTTTTTGCGCTACAATTTGTCACATCGGTCAGTTTGTTGATGGTGAAGAGATGGTTTCGTCCATGTTCTTGAACAGGTGCAGCCTGATTGGGGCTGCGATGAAGCTCCAGTATAAAATAATTGGGTGGTTAGGGCATTAGCTTGTTAAACCCTAAAGCTgcagaatgtttttattttttggacgGTACTGTTCCTCCATTCTCTTTACCAGTATGCCAAGTTTCCTCATTCATACATATCTTTATCTCATCTTCTCCCTTCTACTCACTCAAAGAACCTCCATCTGTCATCTTATGCTTCACTTCCAGGATATTCTTCTTTTACGACTTTAACAAAATCCTTGAGCTAATGTGCCTTAtgaaatgtatatatatttgtttagtGTATTGGTTTGTGCGGGTATTTTGATTGTGTAATAACTTTTTTGAGGTAAATATGCAAGCAGTTTCTGCACTTAGCAATATATCTTTATTACTGCTGCTACCTTCAGCTGTCTTTCACTAATTATTGTCGTGATGTTCACCGTTTGTCAACTGTGGATGAGGATTtttctgtctgtatctctgcCTGGCTACAGTATCTGGCCATTCTTTTTACTTTGCAATTCTTTATTATATCACTACCTTTTCCTGAAAGAGACTGTAGGTACcttcatattattattagagaGATTATCTACCCCACACCCATCGTTTCTAGCCACATTTATGGCACAGGAGAGACAAGAGGATGGCGGGAAGTTTGTGGCTGTCAGCTGGATGAAGGGCTGCATCATTACAACACGTCGACAGGCTGTTCTGCTTCCAAAAAATAATCTCATTTTTGGGAATGCCACTGTGAACTCTTTCAAAGTGCCTGACCTGCCAAGACAGTTGTTAGATTCCAGATGTTTTGACCTGATGTTATGATACAGAATCTGAAAAGGTTTATATTTAGGTTTATACAGTGCTTACCATTAACATATTGTCGAATAACATAACCAGAATCCATATTGACAGATAGATGGGTGGCTGGCAGTGGATGTTTACTTGTGCATTGGCCTGCTTCCACTTCCCCAAAAGCACATCATTACTGCAATTAGCCCTTGGCCCACTGACTTACTTTGGTACTATTGACATAATATAGTTGAATTGATTATTGTCCCATTGGCTTACTATGACCTTATGGACTTATTACAGCCCCACTAAAACTTGCCTCCAAATGATTATGGTCAGATTGATGTCCGTACTAGACTTGTGGTACCATTACACAGTATGTTAACTTACTGTGCTCCAGGTGATATGGGTGTTTACAAGTATTTAAGTAATCTCTGATAGCACTTGTCTATCAGCTGTTTATGTTGTACATAAAACGGAACAAGTGAAGGTTTGTGCCAGTGGACTTTTTAACATGATGTAAGCCAGCAGGTTGGAACTTTAATTGAATATACAGTCCTTTTCCAGGCCAGCAGATGCTAGGGATTTTCCCCTGCATCAAATCCACTAAAGAGACTCACACTTTTGAACAACAACAATGTCTGAGTGCCATGTCCAGGCGCTGTTAGCTCAGTTGAGATCTGTATATACtttgtaaagaagaagaaaaaactgttACAAATGCGCCAGGGACTCCTACAAAGATCACATTCCTCAGACATGTTGTGACACGCTTTGTGCACCTCTGTGTTTTGTAAAAGAGTGTGAAGTTGTACAagaataacaatgtaattactTATTAAATGTAGTTATATCTAA

Function

GO:

id name namespace
GO:0003333 amino acid transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015171 amino acid transmembrane transporter activity molecular_function

KEGG:

id description
K13782 SLC7A10, ASC1; solute carrier family 7 (D/L-type amino acid transporter), member 10

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU33792 lncRNA upstream 15513 1769282 ~ 1774440 (+) True G25144
TU33634 lncRNA upstream 374206 1413095 ~ 1415747 (+) True G25008
TU33637 lncRNA upstream 403689 1386048 ~ 1386264 (+) True G25011
TU33613 lncRNA upstream 487001 1302719 ~ 1302952 (+) True G24991
TU33606 lncRNA upstream 531137 1258519 ~ 1258816 (+) True G24984
TU33862 lncRNA downstream 364812 2182806 ~ 2183770 (+) True G25203
TU33866 lncRNA downstream 364812 2182806 ~ 2183770 (+) False G25203
TU33885 lncRNA downstream 397253 2215247 ~ 2215548 (+) True G25220
TU33890 lncRNA downstream 493610 2311604 ~ 2312082 (+) False adamts18
TU33891 lncRNA downstream 493610 2311604 ~ 2312157 (+) False adamts18
XM_039795404.1 mRNA upstream 91594 1674741 ~ 1698359 (+) True zgc:165481
XM_039796055.1 mRNA upstream 404878 1378010 ~ 1385075 (+) True LOC120556440
XM_039796056.1 mRNA upstream 404878 1378010 ~ 1385075 (+) False LOC120556440
XM_039795697.1 mRNA upstream 425227 1312448 ~ 1364726 (+) True LOC120556244
XM_039794192.1 mRNA upstream 478193 1308822 ~ 1311760 (+) True LOC120555491
XM_039794589.1 mRNA downstream 221469 2039463 ~ 2182754 (+) True phkb
XM_039794588.1 mRNA downstream 221470 2039464 ~ 2182754 (+) False phkb
XM_039794587.1 mRNA downstream 221470 2039464 ~ 2182754 (+) False phkb
XM_039795089.1 mRNA downstream 422420 2240414 ~ 2312096 (+) True adamts18
XM_039795027.1 mRNA downstream 1405875 3223869 ~ 3236019 (+) True LOC120555875
TU33826 other downstream 21339 1839333 ~ 1842811 (+) True G25173
TU33868 other downstream 263964 2081958 ~ 2083319 (+) True G25204
TU34144 other downstream 1966939 3784933 ~ 3785542 (+) True G25431
TU34243 other downstream 2752379 4570373 ~ 4575645 (+) True G25512
TU34491 other downstream 4216215 6034209 ~ 6035193 (+) True G25708

Expression Profile