RNA id: TCONS_00073585


Basic Information

Item Value
RNA id TCONS_00073585
length 770
RNA type processed_transcript
GC content 0.45
exon number 5
gene id XLOC_037398
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 44994214 ~ 44998722 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACATGGTGGAAAAGTCCTGGTCAATGCTCCAGTTTCTAGAGTTCTAGTTAATGAGCAACAAAATGCATACGGTGAGGTTTGTTCAAGTCAGACAtacccaatcctgttcctggagctcTACCTTCCTGTAGAGTTTACCTCCAACCCTGATCAGTAACTGGAGGAagtaggatctgaaggagcactttGTAATCTTAAGGCCAACGCTTTAAGGTTCCAGCTAACTCTGCAGCCAGGTGTGGCTGTGAAGACTGGAGATGAAGATATTGAAATCAAAGCTTCAGTGGTTGTTTCAAATGCTGGTGTGTTCACTACTTTCCAGAAGCTCCTGACTCCAGAGATCCAGGCAGATCCCCAGGTCCAGGAATATCTTAAAGCTCTGAAACCAGGCAAAGGCTTTTTTCAAGTATTTGCTGGCTTCAATGCCACAATGGAAGAACTAGGCATCTCTTCAACTGACATGCGGCTCTATAAGGGCAACAACGTTGATGAGATGATGGAGGAGTACTTTGCTTCAGACAAGCAAGATGCACCTGATAATGTCCCCATGATGTATCTTTCCTTCCCCTCTGCTAAGGATCCCACCTCAAGCACTCGTTTCCCAGGGCAATCACGTATGGTGATCCATACTTTGGTCAATCCAAAGTGGTTTGAACAGTGGGAAAACGTTAATGAGGCTGAAAGAGGTGAAGAATATGAGAACTACAAGATGAGATTTGCCAATCATCTGTTTGACTGGGCTTGTGTCCGTTTTCCCCAGTTGAAAGAAA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-051113-252 Predicted to enable oxidoreductase activity. Is expressed in gut and ovary.

Ensembl:

ensembl_id ENSDART00000131629

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00073574 lncRNA upstream 526840 44430972 ~ 44469429 (+) False XLOC_037393
TCONS_00075190 lncRNA upstream 540161 44455143 ~ 44456108 (+) True XLOC_037394
TCONS_00073565 lncRNA upstream 1116477 43800876 ~ 43879792 (+) True XLOC_037388
TCONS_00073563 lncRNA upstream 1194805 43798143 ~ 43801464 (+) False XLOC_037388
TCONS_00075188 lncRNA upstream 2090647 42732992 ~ 42905622 (+) False XLOC_037385
TCONS_00075191 lncRNA downstream 42342 45039765 ~ 45044991 (+) True XLOC_037399
TCONS_00075192 lncRNA downstream 115073 45112496 ~ 45116841 (+) False XLOC_037401
TCONS_00074933 lncRNA downstream 263961 45261384 ~ 45261761 (+) True XLOC_037403
TCONS_00074934 lncRNA downstream 551364 45548787 ~ 45553378 (+) False XLOC_037404
TCONS_00073593 lncRNA downstream 553645 45551068 ~ 45553378 (+) True XLOC_037404
TCONS_00073581 mRNA upstream 157121 44832032 ~ 44839148 (+) True XLOC_037396
TCONS_00073578 mRNA upstream 170850 44722205 ~ 44825419 (+) False XLOC_037395
TCONS_00073580 mRNA upstream 170924 44722267 ~ 44825345 (+) True XLOC_037395
TCONS_00073577 mRNA upstream 171769 44721808 ~ 44824500 (+) False XLOC_037395
TCONS_00073587 mRNA downstream 115114 45112537 ~ 45122990 (+) True XLOC_037401
TCONS_00073588 mRNA downstream 229605 45227028 ~ 45540996 (+) False XLOC_037402
TCONS_00073590 mRNA downstream 430618 45428041 ~ 45540996 (+) False XLOC_037402
TCONS_00073591 mRNA downstream 495918 45493341 ~ 45541367 (+) False XLOC_037402
TCONS_00073594 mRNA downstream 607987 45605410 ~ 45623647 (+) False XLOC_037405
TCONS_00073582 other upstream 63976 44932175 ~ 44932293 (+) True XLOC_037397
TCONS_00073566 other upstream 1140659 43855495 ~ 43855610 (+) True XLOC_037389
TCONS_00073561 other upstream 1220904 43775251 ~ 43775365 (+) True XLOC_037387
TCONS_00073560 other upstream 1664758 43331395 ~ 43331511 (+) True XLOC_037386
TCONS_00073552 other upstream 2870885 42099737 ~ 42125384 (+) True XLOC_037378
TCONS_00073586 other downstream 66732 45064155 ~ 45064269 (+) True XLOC_037400
TCONS_00073589 other downstream 229678 45227101 ~ 45334105 (+) False XLOC_037402
TCONS_00073592 other downstream 543054 45540477 ~ 45540593 (+) True XLOC_037402
TCONS_00073600 other downstream 824046 45821469 ~ 45821585 (+) True XLOC_037408
TCONS_00073602 other downstream 1423604 46421027 ~ 46431133 (+) False XLOC_037412

Expression Profile

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