Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039795716.1 |
| length | 1125 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 7 |
| gene id | LOC120556255 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053114.1 |
| NCBI id | CM020911.1 |
| chromosome length | 46923577 |
| location | 13750416 ~ 13765627 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0019509 | L-methionine salvage from methylthioadenosine | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0016829 | lyase activity | molecular_function |
| id | description |
|---|---|
| K08964 | mtnB; methylthioribulose-1-phosphate dehydratase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU36269 | lncRNA | upstream | 5965 | 13737183 ~ 13744451 (+) | True | G27220 |
| TU36229 | lncRNA | upstream | 73803 | 13675954 ~ 13676613 (+) | False | slc35c1 |
| TU36225 | lncRNA | upstream | 98921 | 13650883 ~ 13651495 (+) | True | G27190 |
| TU36214 | lncRNA | upstream | 332262 | 13417937 ~ 13418154 (+) | True | G27179 |
| TU36199 | lncRNA | upstream | 348481 | 13401726 ~ 13401935 (+) | True | G27164 |
| TU36287 | lncRNA | downstream | 86440 | 13852067 ~ 13854431 (+) | False | lrrc4cb |
| TU36293 | lncRNA | downstream | 162572 | 13928199 ~ 13936728 (+) | True | G27241 |
| TU36294 | lncRNA | downstream | 162572 | 13928199 ~ 13936728 (+) | False | G27241 |
| TU36310 | lncRNA | downstream | 231486 | 13997113 ~ 14001647 (+) | True | LOC120555409 |
| XR_005638709.1 | lncRNA | downstream | 233908 | 13999535 ~ 14001434 (+) | False | LOC120555409 |
| XM_039795795.1 | mRNA | upstream | 27351 | 13697646 ~ 13723065 (+) | False | slc1a2a |
| XM_039795794.1 | mRNA | upstream | 27351 | 13708869 ~ 13723065 (+) | True | slc1a2a |
| XM_039795796.1 | mRNA | upstream | 27351 | 13708870 ~ 13723065 (+) | False | slc1a2a |
| XM_039795666.1 | mRNA | upstream | 53649 | 13678132 ~ 13696767 (+) | True | si:ch211-102l7.3 |
| XM_039795667.1 | mRNA | upstream | 53649 | 13678132 ~ 13696767 (+) | False | si:ch211-102l7.3 |
| XM_039796070.1 | mRNA | downstream | 44308 | 13809935 ~ 13856423 (+) | True | lrrc4cb |
| XM_039796071.1 | mRNA | downstream | 82433 | 13848060 ~ 13856423 (+) | False | lrrc4cb |
| XM_039794847.1 | mRNA | downstream | 282664 | 14048291 ~ 14055494 (+) | False | traf6 |
| XM_039794848.1 | mRNA | downstream | 282743 | 14048370 ~ 14055494 (+) | False | traf6 |
| XM_039794849.1 | mRNA | downstream | 282929 | 14048556 ~ 14055494 (+) | True | traf6 |
| TU36145 | other | upstream | 512597 | 13235235 ~ 13237819 (+) | True | LOC120556202 |
| TU36106 | other | upstream | 640077 | 13109757 ~ 13110339 (+) | True | G27086 |
| XR_005638880.1 | other | upstream | 1718688 | 12031621 ~ 12031728 (+) | True | LOC120556595 |
| TU35313 | other | upstream | 3890416 | 9847277 ~ 9860000 (+) | True | aldh1a3 |
| TU35242 | other | upstream | 4145980 | 9566831 ~ 9604436 (+) | False | adamts17 |
| TU36647 | other | downstream | 1675850 | 15441477 ~ 15446392 (+) | False | LOC120556433 |
| TU36678 | other | downstream | 1709537 | 15475164 ~ 15486421 (+) | False | LOC120556001 |
| XR_005638756.1 | other | downstream | 3958921 | 17724548 ~ 17742734 (+) | True | LOC120555788 |
| TU37478 | other | downstream | 4796268 | 18561895 ~ 18568480 (+) | False | LOC120556478 |
| TU38013 | other | downstream | 5721619 | 19487246 ~ 19487533 (+) | True | G28581 |
