Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005638729.1 |
| length | 938 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 3 |
| gene id | LOC120555540 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053114.1 |
| NCBI id | CM020911.1 |
| chromosome length | 46923577 |
| location | 6209894 ~ 6211078 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005638728.1 | lncRNA | downstream | 83904 | 6123047 ~ 6125990 (-) | False | LOC120555539 |
| XR_005638727.1 | lncRNA | downstream | 83904 | 6123047 ~ 6125990 (-) | True | LOC120555539 |
| TU34434 | lncRNA | downstream | 304227 | 5905356 ~ 5905667 (-) | True | G25674 |
| TU34432 | lncRNA | downstream | 324733 | 5884844 ~ 5885161 (-) | True | G25672 |
| TU34427 | lncRNA | downstream | 331876 | 5876253 ~ 5878018 (-) | True | G25667 |
| TU34580 | lncRNA | upstream | 42245 | 6253323 ~ 6311134 (-) | True | G25759 |
| TU34592 | lncRNA | upstream | 102905 | 6313983 ~ 6314207 (-) | True | G25769 |
| TU34610 | lncRNA | upstream | 112199 | 6323277 ~ 6326642 (-) | False | ankdd1a |
| TU34609 | lncRNA | upstream | 112338 | 6323416 ~ 6326642 (-) | False | ankdd1a |
| TU34625 | lncRNA | upstream | 195310 | 6406388 ~ 6406597 (-) | True | G25795 |
| XM_039794283.1 | mRNA | downstream | 16358 | 6183632 ~ 6193536 (-) | True | LOC120555536 |
| XM_039794281.1 | mRNA | downstream | 42365 | 6156222 ~ 6167529 (-) | True | LOC120555534 |
| XM_039794280.1 | mRNA | downstream | 56481 | 6145429 ~ 6153413 (-) | True | LOC120555533 |
| XM_039794279.1 | mRNA | downstream | 83766 | 6114211 ~ 6126128 (-) | True | LOC120555532 |
| XM_039794274.1 | mRNA | downstream | 130727 | 6070600 ~ 6079167 (-) | True | LOC120555529 |
| XM_039794282.1 | mRNA | upstream | 23102 | 6234180 ~ 6241650 (-) | True | LOC120555535 |
| XM_039794286.1 | mRNA | upstream | 67059 | 6278137 ~ 6281524 (-) | True | LOC120555542 |
| XM_039795700.1 | mRNA | upstream | 104432 | 6315510 ~ 6321567 (-) | True | znf414 |
| XM_039795701.1 | mRNA | upstream | 112203 | 6323281 ~ 6346561 (-) | True | ankdd1a |
| XM_039795605.1 | mRNA | upstream | 136111 | 6347189 ~ 6379078 (-) | True | plekho2 |
| XR_005638726.1 | other | downstream | 42365 | 6156222 ~ 6167529 (-) | False | LOC120555534 |
| TU33895 | other | downstream | 3932803 | 2275475 ~ 2277091 (-) | True | G25228 |
| TU33896 | other | downstream | 3933885 | 2275475 ~ 2276009 (-) | False | G25228 |
| unassigned_transcript_137 | other | downstream | 4376500 | 1833321 ~ 1833394 (-) | True | trnat-agu_3 |
| XR_005638786.1 | other | downstream | 4567546 | 1588886 ~ 1642348 (-) | False | LOC120556047 |
| TU34701 | other | upstream | 431368 | 6642446 ~ 6644606 (-) | False | dok4 |
| XR_005638761.1 | other | upstream | 1121706 | 7332784 ~ 7344756 (-) | False | lmnl3 |
| TU34939 | other | upstream | 1933129 | 8144207 ~ 8146901 (-) | True | G26071 |
| TU35108 | other | upstream | 2641709 | 8852787 ~ 8979076 (-) | False | LOC120555589 |
| TU35186 | other | upstream | 3083990 | 9295068 ~ 9296746 (-) | True | G26298 |
