Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005638795.1 |
| length | 385 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 4 |
| gene id | LOC120556100 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053114.1 |
| NCBI id | CM020911.1 |
| chromosome length | 46923577 |
| location | 10659569 ~ 10660575 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU35470 | lncRNA | upstream | 180208 | 10479022 ~ 10479361 (+) | True | G26530 |
| TU35466 | lncRNA | upstream | 203957 | 10455401 ~ 10455612 (+) | True | G26526 |
| TU35450 | lncRNA | upstream | 273928 | 10385230 ~ 10385641 (+) | True | G26512 |
| TU35446 | lncRNA | upstream | 323187 | 10330691 ~ 10336382 (+) | True | G26508 |
| TU35442 | lncRNA | upstream | 349566 | 10309674 ~ 10310003 (+) | True | G26505 |
| TU35560 | lncRNA | downstream | 110384 | 10770959 ~ 10771999 (+) | True | G26605 |
| TU35603 | lncRNA | downstream | 218367 | 10878942 ~ 10879304 (+) | True | G26634 |
| TU35605 | lncRNA | downstream | 240053 | 10900628 ~ 10900858 (+) | True | G26636 |
| TU35609 | lncRNA | downstream | 255137 | 10915712 ~ 10916142 (+) | True | G26639 |
| TU35682 | lncRNA | downstream | 516299 | 11176874 ~ 11177288 (+) | True | G26711 |
| XM_039795168.1 | mRNA | upstream | 50488 | 10527838 ~ 10609081 (+) | True | LOC120555948 |
| XM_039795167.1 | mRNA | upstream | 174258 | 10484463 ~ 10485311 (+) | True | LOC120555947 |
| XM_039795154.1 | mRNA | upstream | 194015 | 10425163 ~ 10465554 (+) | True | LOC120555943 |
| XM_039794699.1 | mRNA | upstream | 562930 | 9861152 ~ 10096639 (+) | False | lrrk1 |
| XM_039795169.1 | mRNA | downstream | 81135 | 10741710 ~ 10745326 (+) | True | LOC120555949 |
| XM_039795093.1 | mRNA | downstream | 129270 | 10789845 ~ 10840149 (+) | False | shcbp1 |
| XM_039795095.1 | mRNA | downstream | 129278 | 10789853 ~ 10840149 (+) | False | shcbp1 |
| XM_039795092.1 | mRNA | downstream | 129495 | 10790070 ~ 10840149 (+) | True | shcbp1 |
| XM_039794949.1 | mRNA | downstream | 274058 | 10934633 ~ 11138398 (+) | True | minar1 |
| TU35313 | other | upstream | 799569 | 9847277 ~ 9860000 (+) | True | aldh1a3 |
| TU35242 | other | upstream | 1055133 | 9566831 ~ 9604436 (+) | False | adamts17 |
| TU35121 | other | upstream | 1504226 | 9068729 ~ 9155343 (+) | True | G26236 |
| TU35083 | other | upstream | 1899268 | 8753701 ~ 8760301 (+) | True | G26205 |
| TU34541 | other | upstream | 4369793 | 6289056 ~ 6289776 (+) | False | LOC120555541 |
| XR_005638880.1 | other | downstream | 1371046 | 12031621 ~ 12031728 (+) | True | LOC120556595 |
| TU36106 | other | downstream | 2449182 | 13109757 ~ 13110339 (+) | True | G27086 |
| TU36145 | other | downstream | 2574660 | 13235235 ~ 13237819 (+) | True | LOC120556202 |
| TU36647 | other | downstream | 4780902 | 15441477 ~ 15446392 (+) | False | LOC120556433 |
| TU36678 | other | downstream | 4814589 | 15475164 ~ 15486421 (+) | False | LOC120556001 |
