Item | Value |
---|---|
RNA id | XR_005638821.1 |
length | 159 |
lncRNA type | inter_gene |
GC content | 0.42 |
exon number | 3 |
gene id | LOC120556188 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_053114.1 |
NCBI id | CM020911.1 |
chromosome length | 46923577 |
location | 22159570 ~ 22160895 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | name | namespace |
---|---|---|
GO:0051056 | regulation of small GTPase mediated signal transduction | biological_process |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU38534 | lncRNA | upstream | 29992 | 22128964 ~ 22129578 (+) | True | G29005 |
TU38533 | lncRNA | upstream | 75169 | 22083945 ~ 22084401 (+) | True | G29004 |
TU38519 | lncRNA | upstream | 270021 | 21886682 ~ 21889549 (+) | True | G28990 |
TU38517 | lncRNA | upstream | 270762 | 21886589 ~ 21888808 (+) | False | G28990 |
TU38502 | lncRNA | upstream | 291475 | 21866291 ~ 21868095 (+) | False | gpc5a |
TU38655 | lncRNA | downstream | 207234 | 22368129 ~ 22368503 (+) | True | G29085 |
TU38672 | lncRNA | downstream | 247071 | 22407966 ~ 22408239 (+) | True | G29101 |
TU38711 | lncRNA | downstream | 373047 | 22533942 ~ 22534868 (+) | True | G29135 |
TU38716 | lncRNA | downstream | 387805 | 22548700 ~ 22580247 (+) | True | G29139 |
TU38717 | lncRNA | downstream | 387805 | 22548700 ~ 22601559 (+) | False | G29139 |
XM_039795004.1 | mRNA | upstream | 237694 | 21911406 ~ 21921876 (+) | True | LOC120555860 |
XM_039794999.1 | mRNA | upstream | 287545 | 21720035 ~ 21872025 (+) | False | gpc5a |
XM_039794998.1 | mRNA | upstream | 291384 | 21720035 ~ 21868186 (+) | True | gpc5a |
XM_039795000.1 | mRNA | upstream | 389118 | 21720034 ~ 21770452 (+) | False | gpc5a |
XM_039794087.1 | mRNA | upstream | 450189 | 21699804 ~ 21709381 (+) | True | LOC120555410 |
XM_039795358.1 | mRNA | downstream | 29001 | 22189896 ~ 22227106 (+) | False | lmo7b |
XM_039795356.1 | mRNA | downstream | 29001 | 22189896 ~ 22227106 (+) | False | lmo7b |
XM_039795354.1 | mRNA | downstream | 29001 | 22189896 ~ 22227105 (+) | True | lmo7b |
XM_039795360.1 | mRNA | downstream | 29001 | 22189896 ~ 22227105 (+) | False | lmo7b |
XM_039795359.1 | mRNA | downstream | 29001 | 22189896 ~ 22227105 (+) | False | lmo7b |
TU38307 | other | upstream | 756120 | 21396213 ~ 21403450 (+) | True | G28826 |
TU38234 | other | upstream | 1398423 | 20711104 ~ 20761147 (+) | True | G28770 |
XR_005638835.1 | other | upstream | 2639352 | 19512356 ~ 19520218 (+) | False | ercc3 |
XR_005638872.1 | other | upstream | 2661346 | 19498093 ~ 19498224 (+) | True | LOC120556586 |
XR_005638873.1 | other | upstream | 2661697 | 19497738 ~ 19497873 (+) | True | LOC120556587 |
unassigned_transcript_140 | other | downstream | 386306 | 22547201 ~ 22547272 (+) | True | trnag-ucc_7 |
TU38801 | other | downstream | 603824 | 22764719 ~ 22881652 (+) | False | ankrd11 |
TU38802 | other | downstream | 706825 | 22867720 ~ 22881366 (+) | False | ankrd11 |
TU38851 | other | downstream | 831242 | 22992137 ~ 22992502 (+) | False | LOC120555548 |
TU38916 | other | downstream | 975837 | 23136732 ~ 23137027 (+) | True | G29292 |