Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00073630 |
| length | 1117 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 7 |
| gene id | XLOC_037429 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 48819280 ~ 48835494 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007059 | chromosome segregation | biological_process |
| GO:0000777 | condensed chromosome kinetochore | cellular_component |
| GO:0031262 | Ndc80 complex | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ko03036 | Chromosome and associated proteins |
| id | description |
|---|---|
| ZDB-GENE-060810-13 | Predicted to be involved in chromosome segregation. Predicted to act upstream of or within cell division. Predicted to be located in nucleus. Predicted to be part of Ndc80 complex. Orthologous to human SPC25 (SPC25 component of NDC80 kinetochore complex). |
| ensembl_id | ENSDART00000112555 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00075208 | lncRNA | upstream | 63441 | 48707575 ~ 48755839 (+) | False | XLOC_037428 |
| TCONS_00073632 | lncRNA | downstream | 14160 | 48845578 ~ 48858403 (+) | True | XLOC_037430 |
| TCONS_00075212 | lncRNA | downstream | 38478 | 48869896 ~ 48877349 (+) | True | XLOC_037431 |
| TCONS_00075213 | lncRNA | downstream | 917918 | 49749336 ~ 49754453 (+) | True | XLOC_037434 |
| TCONS_00075214 | lncRNA | downstream | 1038034 | 49869452 ~ 49885824 (+) | False | XLOC_037436 |
| TCONS_00073639 | lncRNA | downstream | 1038274 | 49869692 ~ 49871467 (+) | False | XLOC_037436 |
| TCONS_00073629 | mRNA | upstream | 2161 | 48761455 ~ 48817119 (+) | True | XLOC_037428 |
| TCONS_00073628 | mRNA | upstream | 3249 | 48755638 ~ 48816031 (+) | False | XLOC_037428 |
| TCONS_00073624 | mRNA | upstream | 147026 | 48455909 ~ 48672254 (+) | True | XLOC_037426 |
| TCONS_00073623 | mRNA | upstream | 150307 | 48415043 ~ 48668973 (+) | False | XLOC_037426 |
| TCONS_00073622 | mRNA | upstream | 551634 | 48232572 ~ 48267646 (+) | True | XLOC_037424 |
| TCONS_00073633 | mRNA | downstream | 112053 | 48943471 ~ 49052004 (+) | True | XLOC_037432 |
| TCONS_00073634 | mRNA | downstream | 827696 | 49659114 ~ 49745424 (+) | False | XLOC_037433 |
| TCONS_00073636 | mRNA | downstream | 881450 | 49712868 ~ 49745424 (+) | False | XLOC_037433 |
| TCONS_00073635 | mRNA | downstream | 881450 | 49712868 ~ 49745424 (+) | False | XLOC_037433 |
| TCONS_00073637 | mRNA | downstream | 896193 | 49727611 ~ 49745424 (+) | True | XLOC_037433 |
| TCONS_00073602 | other | upstream | 2388147 | 46421027 ~ 46431133 (+) | False | XLOC_037412 |
| TCONS_00073600 | other | upstream | 2997695 | 45821469 ~ 45821585 (+) | True | XLOC_037408 |
| TCONS_00073592 | other | upstream | 3278687 | 45540477 ~ 45540593 (+) | True | XLOC_037402 |
| TCONS_00073589 | other | upstream | 3485175 | 45227101 ~ 45334105 (+) | False | XLOC_037402 |
| TCONS_00073586 | other | upstream | 3755011 | 45064155 ~ 45064269 (+) | True | XLOC_037400 |
| TCONS_00073638 | other | downstream | 953902 | 49785320 ~ 49785437 (+) | True | XLOC_037435 |
| TCONS_00073648 | other | downstream | 1257582 | 50089000 ~ 50090257 (+) | True | XLOC_037440 |
| TCONS_00073655 | other | downstream | 1968939 | 50800357 ~ 50800473 (+) | True | XLOC_037446 |
| TCONS_00073665 | other | downstream | 3250893 | 52082311 ~ 52082437 (+) | True | XLOC_037460 |
| TCONS_00073706 | other | downstream | 6416782 | 55248200 ~ 55248314 (+) | True | XLOC_037493 |
