Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU48786 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G36411 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 7123300 ~ 7123519 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48784 | lncRNA | upstream | 1862 | 7119896 ~ 7121438 (+) | True | G36409 |
| TU48783 | lncRNA | upstream | 6080 | 7114449 ~ 7117220 (+) | True | G36408 |
| TU48742 | lncRNA | upstream | 167445 | 6955533 ~ 6955855 (+) | True | G36370 |
| TU48741 | lncRNA | upstream | 169393 | 6953452 ~ 6953907 (+) | True | G36369 |
| TU48740 | lncRNA | upstream | 172251 | 6948079 ~ 6951049 (+) | True | G36368 |
| TU48787 | lncRNA | downstream | 1423 | 7124942 ~ 7125628 (+) | True | G36412 |
| TU48801 | lncRNA | downstream | 22598 | 7146117 ~ 7147050 (+) | True | G36424 |
| TU48803 | lncRNA | downstream | 24472 | 7147991 ~ 7148691 (+) | True | G36426 |
| TU48808 | lncRNA | downstream | 29284 | 7152803 ~ 7154495 (+) | True | G36431 |
| TU48831 | lncRNA | downstream | 61850 | 7185369 ~ 7187214 (+) | True | si:dkey-245f22.3 |
| XM_039797831.1 | mRNA | upstream | 32548 | 7082265 ~ 7090752 (+) | False | LOC120557474 |
| XM_039797830.1 | mRNA | upstream | 34191 | 7082265 ~ 7089109 (+) | True | LOC120557474 |
| XM_039798612.1 | mRNA | upstream | 181688 | 6882146 ~ 6941612 (+) | True | sema3fb |
| XM_039797955.1 | mRNA | downstream | 59680 | 7183199 ~ 7185639 (+) | False | si:dkey-245f22.3 |
| XM_039797957.1 | mRNA | downstream | 59680 | 7183199 ~ 7185639 (+) | False | si:dkey-245f22.3 |
| XM_039797595.1 | mRNA | downstream | 165388 | 7288907 ~ 7306343 (+) | True | hcfc1a |
| XM_039797596.1 | mRNA | downstream | 165388 | 7288907 ~ 7306343 (+) | False | hcfc1a |
| XM_039797600.1 | mRNA | downstream | 189215 | 7312734 ~ 7317082 (+) | True | gata1a |
| TU48651 | other | upstream | 484913 | 6635302 ~ 6638387 (+) | False | setmar |
| TU48489 | other | upstream | 1070531 | 6035100 ~ 6052769 (+) | False | rybpb |
| TU48469 | other | upstream | 1198900 | 5920924 ~ 5924400 (+) | True | G36156 |
| XR_005638977.1 | other | upstream | 2189136 | 4911700 ~ 4934164 (+) | True | cdk5rap1 |
| TU48863 | other | downstream | 118690 | 7242209 ~ 7258950 (+) | False | G36458 |
| TU49260 | other | downstream | 1104243 | 8227762 ~ 8228720 (+) | True | G36744 |
| unassigned_transcript_183 | other | downstream | 1493479 | 8616998 ~ 8617069 (+) | True | trnae-cuc_4 |
| unassigned_transcript_186 | other | downstream | 1518511 | 8642030 ~ 8642101 (+) | True | trnae-cuc_5 |
| unassigned_transcript_189 | other | downstream | 1587490 | 8711009 ~ 8711080 (+) | True | trnae-cuc_6 |
