Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU48885 |
| length | 799 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G36470 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 7273081 ~ 7273879 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48884 | lncRNA | upstream | 281 | 7272454 ~ 7272800 (+) | True | G36469 |
| TU48865 | lncRNA | upstream | 713 | 7243862 ~ 7272368 (+) | False | G36458 |
| TU48853 | lncRNA | upstream | 4411 | 7243862 ~ 7268670 (+) | False | G36458 |
| TU48858 | lncRNA | upstream | 4411 | 7259016 ~ 7268670 (+) | False | G36458 |
| TU48867 | lncRNA | upstream | 4411 | 7259016 ~ 7268670 (+) | False | G36458 |
| TU48876 | lncRNA | downstream | 21507 | 7295386 ~ 7306311 (+) | False | hcfc1a |
| XR_005638960.1 | lncRNA | downstream | 55416 | 7329295 ~ 7330628 (+) | True | LOC120557355 |
| TU48909 | lncRNA | downstream | 83872 | 7357751 ~ 7359732 (+) | True | G36485 |
| TU48980 | lncRNA | downstream | 104816 | 7378695 ~ 7454262 (+) | True | G36529 |
| TU49021 | lncRNA | downstream | 202255 | 7476134 ~ 7479379 (+) | False | G36563 |
| XM_039797955.1 | mRNA | upstream | 87442 | 7183199 ~ 7185639 (+) | False | si:dkey-245f22.3 |
| XM_039797957.1 | mRNA | upstream | 87442 | 7183199 ~ 7185639 (+) | False | si:dkey-245f22.3 |
| XM_039797831.1 | mRNA | upstream | 182329 | 7082265 ~ 7090752 (+) | False | LOC120557474 |
| XM_039797830.1 | mRNA | upstream | 183972 | 7082265 ~ 7089109 (+) | True | LOC120557474 |
| XM_039798616.1 | mRNA | upstream | 331469 | 6905953 ~ 6941612 (+) | False | sema3fb |
| XM_039797595.1 | mRNA | downstream | 15028 | 7288907 ~ 7306343 (+) | True | hcfc1a |
| XM_039797596.1 | mRNA | downstream | 15028 | 7288907 ~ 7306343 (+) | False | hcfc1a |
| XM_039797600.1 | mRNA | downstream | 38855 | 7312734 ~ 7317082 (+) | True | gata1a |
| XM_039797604.1 | mRNA | downstream | 61587 | 7335466 ~ 7337312 (+) | True | mafbb |
| XM_039797261.1 | mRNA | downstream | 88061 | 7361940 ~ 7377650 (+) | False | si:ch211-232b12.5 |
| TU48863 | other | upstream | 14131 | 7242209 ~ 7258950 (+) | False | G36458 |
| TU48651 | other | upstream | 634694 | 6635302 ~ 6638387 (+) | False | setmar |
| TU48489 | other | upstream | 1220312 | 6035100 ~ 6052769 (+) | False | rybpb |
| TU48469 | other | upstream | 1348681 | 5920924 ~ 5924400 (+) | True | G36156 |
| XR_005638978.1 | other | upstream | 2338917 | 4911700 ~ 4934164 (+) | False | cdk5rap1 |
| TU49260 | other | downstream | 953883 | 8227762 ~ 8228720 (+) | True | G36744 |
| unassigned_transcript_183 | other | downstream | 1343119 | 8616998 ~ 8617069 (+) | True | trnae-cuc_4 |
| unassigned_transcript_186 | other | downstream | 1368151 | 8642030 ~ 8642101 (+) | True | trnae-cuc_5 |
| unassigned_transcript_189 | other | downstream | 1437130 | 8711009 ~ 8711080 (+) | True | trnae-cuc_6 |
| unassigned_transcript_190 | other | downstream | 1465088 | 8738967 ~ 8739038 (+) | True | trnae-cuc_7 |
