Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU51682 |
| length | 903 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G38495 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 14712784 ~ 14714517 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0043603 | cellular amide metabolic process | biological_process |
| GO:0043604 | amide biosynthetic process | biological_process |
| GO:0009058 | biosynthetic process | biological_process |
| GO:0009059 | macromolecule biosynthetic process | biological_process |
| GO:0043043 | peptide biosynthetic process | biological_process |
| GO:1901576 | organic substance biosynthetic process | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0010467 | gene expression | biological_process |
| GO:0044249 | cellular biosynthetic process | biological_process |
| GO:0044271 | cellular nitrogen compound biosynthetic process | biological_process |
| GO:0006518 | peptide metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
| GO:0005681 | spliceosomal complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51683 | lncRNA | upstream | 650 | 14710726 ~ 14712134 (+) | True | G38496 |
| TU51621 | lncRNA | upstream | 22159 | 14642932 ~ 14690625 (+) | False | G38449 |
| TU51620 | lncRNA | upstream | 22159 | 14689000 ~ 14690625 (+) | True | G38449 |
| TU51611 | lncRNA | upstream | 102362 | 14607839 ~ 14610422 (+) | True | G38441 |
| TU51447 | lncRNA | upstream | 218044 | 14492903 ~ 14494740 (+) | True | G38331 |
| TU51699 | lncRNA | downstream | 40766 | 14755283 ~ 14757358 (+) | False | cdk4 |
| TU51717 | lncRNA | downstream | 50780 | 14765297 ~ 14856007 (+) | False | znf740a |
| TU51712 | lncRNA | downstream | 92131 | 14806648 ~ 14857069 (+) | False | znf740a |
| TU51749 | lncRNA | downstream | 148805 | 14863322 ~ 14864107 (+) | True | G38526 |
| TU51770 | lncRNA | downstream | 201161 | 14915678 ~ 14972297 (+) | True | G38538 |
| XM_039799141.1 | mRNA | upstream | 44330 | 14652797 ~ 14668454 (+) | True | LOC120558200 |
| XM_039799142.1 | mRNA | upstream | 45211 | 14652797 ~ 14667573 (+) | False | LOC120558200 |
| XM_039799143.1 | mRNA | upstream | 45211 | 14652797 ~ 14667573 (+) | False | LOC120558200 |
| XM_039799098.1 | mRNA | upstream | 62350 | 14638398 ~ 14650434 (+) | True | timeless |
| XM_039799140.1 | mRNA | upstream | 75344 | 14631878 ~ 14637440 (+) | True | prph |
| XM_039796369.1 | mRNA | downstream | 26092 | 14740609 ~ 14757359 (+) | True | cdk4 |
| XM_039797384.1 | mRNA | downstream | 43322 | 14757839 ~ 14777895 (+) | False | LOC120557243 |
| XM_039797383.1 | mRNA | downstream | 43323 | 14757840 ~ 14777895 (+) | True | LOC120557243 |
| XM_039796966.1 | mRNA | downstream | 118844 | 14833361 ~ 14856782 (+) | False | znf740a |
| XM_039796972.1 | mRNA | downstream | 118844 | 14833361 ~ 14856782 (+) | False | znf740a |
| TU51384 | other | upstream | 375024 | 14335389 ~ 14337760 (+) | True | LOC120557952 |
| TU51331 | other | upstream | 479259 | 14227215 ~ 14233525 (+) | False | LOC120557956 |
| TU51174 | other | upstream | 1184465 | 13456929 ~ 13528319 (+) | False | tfeb |
| TU51060 | other | upstream | 1344495 | 13365554 ~ 13368289 (+) | False | mdm4 |
| unassigned_transcript_200 | other | upstream | 1426473 | 13286239 ~ 13286311 (+) | True | trnar-acg_15 |
| TU51738 | other | downstream | 93835 | 14808352 ~ 14816436 (+) | True | G38517 |
| XR_005638919.1 | other | downstream | 150542 | 14865059 ~ 14874459 (+) | True | calcoco1b |
| TU52135 | other | downstream | 930994 | 15645511 ~ 15647851 (+) | True | G38834 |
| TU52306 | other | downstream | 1250897 | 15965414 ~ 15966107 (+) | False | ccdc174 |
| TU52330 | other | downstream | 1335388 | 16049905 ~ 16050430 (+) | False | eefsec |
