Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU59473 |
| length | 671 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G44387 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 38331380 ~ 38332050 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005638933.1 | lncRNA | upstream | 83060 | 38247303 ~ 38248320 (+) | True | LOC120557055 |
| XR_005638935.1 | lncRNA | upstream | 103030 | 38227579 ~ 38228350 (+) | True | LOC120557056 |
| XR_005638934.1 | lncRNA | upstream | 103030 | 38227582 ~ 38228350 (+) | False | LOC120557056 |
| TU59403 | lncRNA | upstream | 157273 | 38173602 ~ 38174107 (+) | False | LOC120557027 |
| TU59401 | lncRNA | upstream | 170686 | 38159937 ~ 38160694 (+) | True | G44325 |
| TU59488 | lncRNA | downstream | 77952 | 38410002 ~ 38412477 (+) | True | G44402 |
| TU59489 | lncRNA | downstream | 78575 | 38410625 ~ 38412477 (+) | False | G44402 |
| TU59487 | lncRNA | downstream | 80777 | 38412827 ~ 38413939 (+) | True | G44401 |
| TU59504 | lncRNA | downstream | 123872 | 38455922 ~ 38456336 (+) | True | G44417 |
| TU59506 | lncRNA | downstream | 124631 | 38456681 ~ 38457162 (+) | True | G44419 |
| XM_039797054.1 | mRNA | upstream | 5390 | 38325543 ~ 38325990 (+) | True | LOC120557038 |
| XM_039797051.1 | mRNA | upstream | 18893 | 38311854 ~ 38312487 (+) | True | LOC120557035 |
| XM_039797044.1 | mRNA | upstream | 22396 | 38306826 ~ 38308984 (+) | True | LOC120557029 |
| XM_039797065.1 | mRNA | upstream | 27019 | 38303664 ~ 38304361 (+) | True | LOC120557049 |
| XM_039797069.1 | mRNA | upstream | 28606 | 38301095 ~ 38302774 (+) | True | LOC120557052 |
| XM_039797043.1 | mRNA | downstream | 10393 | 38342443 ~ 38344251 (+) | True | LOC120557028 |
| XM_039797053.1 | mRNA | downstream | 14757 | 38346807 ~ 38347243 (+) | True | LOC120557037 |
| XM_039798178.1 | mRNA | downstream | 34009 | 38366059 ~ 38409274 (+) | True | LOC120557646 |
| XM_039798639.1 | mRNA | downstream | 402117 | 38734167 ~ 38784058 (+) | False | rbpjl |
| XM_039798640.1 | mRNA | downstream | 402141 | 38734191 ~ 38784058 (+) | False | rbpjl |
| TU59402 | other | upstream | 164162 | 38166182 ~ 38167218 (+) | False | LOC120557027 |
| unassigned_transcript_220 | other | upstream | 2368770 | 35962539 ~ 35962610 (+) | True | trnac-gca_18 |
| TU58929 | other | upstream | 2665339 | 35664143 ~ 35666041 (+) | True | G43924 |
| unassigned_transcript_205 | other | upstream | 2845145 | 35463772 ~ 35486235 (+) | True | LOC120556915 |
| XR_005639074.1 | other | upstream | 2891241 | 35439977 ~ 35440139 (+) | True | LOC120558245 |
| TU59524 | other | downstream | 280587 | 38612637 ~ 38612971 (+) | True | G44436 |
| XR_005638991.1 | other | downstream | 568522 | 38900572 ~ 38903056 (+) | True | LOC120557667 |
| XR_005638992.1 | other | downstream | 621068 | 38953118 ~ 38981733 (+) | True | LOC120557670 |
| TU59701 | other | downstream | 1481910 | 39813960 ~ 39821908 (+) | False | G44581 |
| TU59760 | other | downstream | 1824158 | 40156208 ~ 40163610 (+) | False | LOC120557666 |
