Item | Value |
---|---|
RNA id | TU59588 |
length | 345 |
lncRNA type | inter_gene |
GC content | 0.36 |
exon number | 1 |
gene id | G44488 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_053115.1 |
NCBI id | CM020912.1 |
chromosome length | 44863486 |
location | 38824675 ~ 38825019 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
XR_005638998.1 | lncRNA | upstream | 11231 | 38806446 ~ 38813444 (+) | True | LOC120557691 |
TU59576 | lncRNA | upstream | 12045 | 38806469 ~ 38812630 (+) | False | LOC120557691 |
TU59542 | lncRNA | upstream | 110852 | 38709982 ~ 38713823 (+) | True | G44454 |
TU59539 | lncRNA | upstream | 141214 | 38683161 ~ 38683461 (+) | True | G44451 |
TU59537 | lncRNA | upstream | 141584 | 38682795 ~ 38683091 (+) | True | G44449 |
TU59589 | lncRNA | downstream | 16015 | 38841034 ~ 38841233 (+) | True | G44489 |
TU59600 | lncRNA | downstream | 163049 | 38988068 ~ 38988533 (+) | True | G44499 |
XR_005639003.1 | lncRNA | downstream | 274966 | 39099985 ~ 39100496 (+) | True | LOC120557696 |
XR_005639001.1 | lncRNA | downstream | 378650 | 39203669 ~ 39205218 (+) | True | LOC120557694 |
TU59633 | lncRNA | downstream | 674080 | 39499099 ~ 39865513 (+) | True | G44527 |
XM_039798639.1 | mRNA | upstream | 40617 | 38734167 ~ 38784058 (+) | False | rbpjl |
XM_039798640.1 | mRNA | upstream | 40617 | 38734191 ~ 38784058 (+) | False | rbpjl |
XM_039798641.1 | mRNA | upstream | 40617 | 38746631 ~ 38784058 (+) | True | rbpjl |
XM_039798642.1 | mRNA | upstream | 40617 | 38756133 ~ 38784058 (+) | False | rbpjl |
XM_039798178.1 | mRNA | upstream | 415401 | 38366059 ~ 38409274 (+) | True | LOC120557646 |
XM_039798209.1 | mRNA | downstream | 32148 | 38857167 ~ 38886428 (+) | True | LOC120557663 |
XM_039798228.1 | mRNA | downstream | 72341 | 38897360 ~ 38913530 (+) | False | LOC120557676 |
XM_039798226.1 | mRNA | downstream | 72342 | 38897361 ~ 38913530 (+) | True | LOC120557676 |
XM_039798213.1 | mRNA | downstream | 75553 | 38900572 ~ 38903056 (+) | False | LOC120557667 |
XM_039797149.1 | mRNA | downstream | 116553 | 38941572 ~ 38942817 (+) | True | LOC120557116 |
TU59524 | other | upstream | 211704 | 38612637 ~ 38612971 (+) | True | G44436 |
TU59402 | other | upstream | 657457 | 38166182 ~ 38167218 (+) | False | LOC120557027 |
unassigned_transcript_220 | other | upstream | 2862065 | 35962539 ~ 35962610 (+) | True | trnac-gca_18 |
TU58929 | other | upstream | 3158634 | 35664143 ~ 35666041 (+) | True | G43924 |
unassigned_transcript_205 | other | upstream | 3338440 | 35463772 ~ 35486235 (+) | True | LOC120556915 |
XR_005638991.1 | other | downstream | 75553 | 38900572 ~ 38903056 (+) | True | LOC120557667 |
XR_005638992.1 | other | downstream | 128099 | 38953118 ~ 38981733 (+) | True | LOC120557670 |
TU59701 | other | downstream | 988941 | 39813960 ~ 39821908 (+) | False | G44581 |
TU59760 | other | downstream | 1331189 | 40156208 ~ 40163610 (+) | False | LOC120557666 |
TU59833 | other | downstream | 1655657 | 40480676 ~ 40506570 (+) | True | G44690 |