RNA id: TU59781


Basic Information

Item Value
RNA id TU59781
length 264
lncRNA type read_through
GC content 0.46
exon number 2
gene id G44645
representative False

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 40165484 ~ 40167629 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtgtgtgtgtgtgtgtgtgtgtgtgtggggtctaatgttgtggtgtagcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtagggtctaatgttgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagggtctaatgttgtggtgtattagtgagtgtgtgtgtgtagggtctaatgTTGTGGTGtattagtgagtgtgtgtgtgtagggtctaatgttgtggtgtattagtgagtgtgtgtgtgtagggtctaatgttgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU59711 lncRNA upstream 265161 39898569 ~ 39900323 (+) True G44590
TU59705 lncRNA upstream 317839 39845181 ~ 39847645 (+) True G44585
TU59700 lncRNA upstream 347986 39816607 ~ 39817498 (+) True G44581
TU59691 lncRNA upstream 412298 39747185 ~ 39753186 (+) False LOC120557680
XR_005639002.1 lncRNA upstream 422134 39740987 ~ 39743350 (+) True LOC120557695
TU59801 lncRNA downstream 125354 40291364 ~ 40292492 (+) True G44662
TU59802 lncRNA downstream 132617 40298627 ~ 40299270 (+) True G44663
TU59799 lncRNA downstream 133286 40299296 ~ 40301807 (+) True G44660
TU59803 lncRNA downstream 139204 40305214 ~ 40311637 (+) True G44664
TU59822 lncRNA downstream 221556 40387566 ~ 40393706 (+) True G44680
XM_039798233.1 mRNA upstream 391234 39747173 ~ 39774250 (+) True LOC120557680
XM_039798234.1 mRNA upstream 391234 39747173 ~ 39774250 (+) False LOC120557680
XM_039797151.1 mRNA upstream 851802 39294637 ~ 39313682 (+) True LOC120557118
XM_039798211.1 mRNA upstream 888505 39249166 ~ 39276979 (+) True LOC120557665
XM_039798239.1 mRNA upstream 1023134 39122788 ~ 39142350 (+) True LOC120557683
XM_039798224.1 mRNA downstream 353932 40519942 ~ 40541231 (+) False LOC120557674
XM_039797160.1 mRNA downstream 388940 40554950 ~ 40583705 (+) True LOC120557127
XM_039798225.1 mRNA downstream 479178 40645188 ~ 40647514 (+) True LOC120557675
XM_039798243.1 mRNA downstream 500842 40666852 ~ 40668742 (+) True LOC120557687
XM_039798240.1 mRNA downstream 518812 40684822 ~ 40716121 (+) True LOC120557684
TU59760 other upstream 1874 40156208 ~ 40163610 (+) False LOC120557666
TU59701 other upstream 343576 39813960 ~ 39821908 (+) False G44581
XR_005638992.1 other upstream 1183751 38953118 ~ 38981733 (+) True LOC120557670
XR_005638991.1 other upstream 1262428 38900572 ~ 38903056 (+) True LOC120557667
TU59524 other upstream 1552513 38612637 ~ 38612971 (+) True G44436
TU59833 other downstream 314666 40480676 ~ 40506570 (+) True G44690
TU59835 other downstream 338342 40504352 ~ 40506056 (+) False LOC120557692
XR_005638993.1 other downstream 353932 40519942 ~ 40541231 (+) False LOC120557674
XR_005638994.1 other downstream 500189 40666199 ~ 40667506 (+) False LOC120557687
TU60455 other downstream 1584993 41751003 ~ 41763651 (+) False LOC120557139

Expression Profile