RNA id: TU59822


Basic Information

Item Value
RNA id TU59822
length 211
lncRNA type read_through
GC content 0.45
exon number 2
gene id G44680
representative True

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 40387566 ~ 40393706 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagggtctaatgttgtggtgtattagtgtgtgtgtgtgtgtgtgtgtgcttaggGTCCTAATGTTGtggtgtattagtgtgtgtgtgtgtgtgtgtgtgtagggtctaatgttgtggtgtattagtgtgtgtgtgtagggtctaatgttgtggtgtattagagtgtgtgtgtgtgtgt

Function

GO:

id name namespace
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU59803 lncRNA upstream 75929 40305214 ~ 40311637 (+) True G44664
TU59799 lncRNA upstream 85759 40299296 ~ 40301807 (+) True G44660
TU59802 lncRNA upstream 88296 40298627 ~ 40299270 (+) True G44663
TU59801 lncRNA upstream 95074 40291364 ~ 40292492 (+) True G44662
TU59780 lncRNA upstream 219937 40165484 ~ 40167629 (+) True G44645
TU59769 lncRNA downstream 18062 40411768 ~ 40432585 (+) True G44635
TU59750 lncRNA downstream 18905 40412611 ~ 40431155 (+) False G44621
TU59749 lncRNA downstream 37835 40431541 ~ 40545375 (+) True G44621
TU59768 lncRNA downstream 50167 40443873 ~ 40627311 (+) True G44634
TU59831 lncRNA downstream 78918 40472624 ~ 40494622 (+) True G44689
XM_039798233.1 mRNA upstream 613316 39747173 ~ 39774250 (+) True LOC120557680
XM_039798234.1 mRNA upstream 613316 39747173 ~ 39774250 (+) False LOC120557680
XM_039797151.1 mRNA upstream 1073884 39294637 ~ 39313682 (+) True LOC120557118
XM_039798211.1 mRNA upstream 1110587 39249166 ~ 39276979 (+) True LOC120557665
XM_039798239.1 mRNA upstream 1245216 39122788 ~ 39142350 (+) True LOC120557683
XM_039798224.1 mRNA downstream 126236 40519942 ~ 40541231 (+) False LOC120557674
XM_039797160.1 mRNA downstream 161244 40554950 ~ 40583705 (+) True LOC120557127
XM_039798225.1 mRNA downstream 251482 40645188 ~ 40647514 (+) True LOC120557675
XM_039798243.1 mRNA downstream 273146 40666852 ~ 40668742 (+) True LOC120557687
XM_039798240.1 mRNA downstream 291116 40684822 ~ 40716121 (+) True LOC120557684
TU59760 other upstream 223956 40156208 ~ 40163610 (+) False LOC120557666
TU59701 other upstream 565658 39813960 ~ 39821908 (+) False G44581
XR_005638992.1 other upstream 1405833 38953118 ~ 38981733 (+) True LOC120557670
XR_005638991.1 other upstream 1484510 38900572 ~ 38903056 (+) True LOC120557667
TU59524 other upstream 1774595 38612637 ~ 38612971 (+) True G44436
TU59833 other downstream 86970 40480676 ~ 40506570 (+) True G44690
TU59835 other downstream 110646 40504352 ~ 40506056 (+) False LOC120557692
XR_005638993.1 other downstream 126236 40519942 ~ 40541231 (+) False LOC120557674
XR_005638994.1 other downstream 272493 40666199 ~ 40667506 (+) False LOC120557687
TU60455 other downstream 1357297 41751003 ~ 41763651 (+) False LOC120557139

Expression Profile