Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039796730.1 |
| length | 1315 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 8 |
| gene id | endou |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 15657531 ~ 15661996 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006898 | receptor-mediated endocytosis | biological_process |
| GO:0006955 | immune response | biological_process |
| GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0004521 | endoribonuclease activity | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| GO:0030247 | polysaccharide binding | molecular_function |
| GO:0005044 | scavenger receptor activity | molecular_function |
| id | description |
|---|---|
| K14648 | ENDOU, PP11; poly(U)-specific endoribonuclease |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU52133 | lncRNA | upstream | 13132 | 15644061 ~ 15644399 (+) | True | G38832 |
| TU52129 | lncRNA | upstream | 30691 | 15626311 ~ 15626840 (+) | True | G38829 |
| TU52079 | lncRNA | upstream | 114159 | 15542253 ~ 15543372 (+) | True | G38788 |
| TU52045 | lncRNA | upstream | 194079 | 15462301 ~ 15463452 (+) | True | G38762 |
| TU52021 | lncRNA | upstream | 260024 | 15396729 ~ 15397507 (+) | True | G38738 |
| TU52158 | lncRNA | downstream | 11983 | 15673979 ~ 15755059 (+) | True | G38852 |
| TU52172 | lncRNA | downstream | 57000 | 15718996 ~ 15722184 (+) | True | G38858 |
| TU52174 | lncRNA | downstream | 65983 | 15727979 ~ 15729400 (+) | True | G38860 |
| TU52211 | lncRNA | downstream | 98796 | 15760792 ~ 15762315 (+) | True | G38885 |
| TU52290 | lncRNA | downstream | 252543 | 15914539 ~ 15914901 (+) | True | G38948 |
| XM_039798065.1 | mRNA | upstream | 13976 | 15631352 ~ 15643555 (+) | True | smarcc2 |
| XM_039798066.1 | mRNA | upstream | 13976 | 15631352 ~ 15643555 (+) | False | smarcc2 |
| XM_039796349.1 | mRNA | upstream | 31486 | 15606682 ~ 15626045 (+) | True | LOC120556683 |
| XM_039798516.1 | mRNA | downstream | 14871 | 15676867 ~ 15709140 (+) | True | LOC120557865 |
| XM_039798517.1 | mRNA | downstream | 22086 | 15684082 ~ 15709140 (+) | False | LOC120557865 |
| XM_039796376.1 | mRNA | downstream | 48220 | 15710216 ~ 15710890 (+) | True | LOC120556700 |
| XM_039796501.1 | mRNA | downstream | 51253 | 15713249 ~ 15715495 (+) | True | LOC120556777 |
| XM_039798870.1 | mRNA | downstream | 74549 | 15736545 ~ 15741669 (+) | True | tac3b |
| TU52135 | other | upstream | 9680 | 15645511 ~ 15647851 (+) | True | G38834 |
| XR_005638919.1 | other | upstream | 783072 | 14865059 ~ 14874459 (+) | True | calcoco1b |
| TU51738 | other | upstream | 841095 | 14808352 ~ 14816436 (+) | True | G38517 |
| TU51384 | other | upstream | 1319771 | 14335389 ~ 14337760 (+) | True | LOC120557952 |
| TU51331 | other | upstream | 1424006 | 14227215 ~ 14233525 (+) | False | LOC120557956 |
| TU52306 | other | downstream | 303418 | 15965414 ~ 15966107 (+) | False | ccdc174 |
| TU52330 | other | downstream | 387909 | 16049905 ~ 16050430 (+) | False | eefsec |
| TU52503 | other | downstream | 771242 | 16433238 ~ 16435229 (+) | True | G39104 |
| TU52524 | other | downstream | 855540 | 16517536 ~ 16543580 (+) | True | G39116 |
| TU52801 | other | downstream | 1450117 | 17112113 ~ 17119890 (+) | True | G39351 |
