RNA id: TCONS_00073841


Basic Information

Item Value
RNA id TCONS_00073841
length 1587
RNA type processed_transcript
GC content 0.38
exon number 4
gene id XLOC_037598
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 4443918 ~ 4447104 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACAAGAGATTTCACCACATAAAAATTAACAAGCGGTCAGTAAATTATtcccagccggcacacgaccgaccttcaacgttgaaatatggttgaaataaggtcagatgtgttttgaacgttgaaataatgttgatagaacgtttaatgttgaacggttgaaaaacagcctgcatatgacaaggcttcaacgttgaaatgtggttgaaaatacgtcagttgttgctttaatgttgaaacaatgttgaatgataaatggttgaaaaaagttacagaaattcttgtacaaatcaacgttgaaattttttttatcatggtctgtatgttgaattaacgtcatggcttgacccaatattcaacatgtttggttaccatggtatcggaggactcggcgcacgcggccacgcgcagcgcttcacttcacttaattatgaacacctgacctgcagtgcagcagaattcagagacatgtaacttgttactccagagacgcactaacttgcacagcattgaatggaaaaggctttgtccatgtccagttgaggggcatcaagaacacgcagatagcctaaacctgtgtcagcctggacagactgcGGTTCTGCTACTCCACGCCaatgcttttgtatggatgtctgactactacagtgttctctaaaggttttctggaagctccatttgagggcatcaaggacatactgatggcctaaaccagtgtcagcctagacagacagacatctattgcagttctattacacaagaccaaactctctgcttttgtatggatgtctgactagtacggtgttctctaaaggtataactggagcaaaacaacagcatccgttacagtgaaatttgtgttcataaaagatagtgatatatgtgtaacaggtccagtacatttgtcataaaggttaaatcacagtaagtactgtaaaaataacttgtttgcctctgccacaacaggtcatggtgtgtgcatactgctcgtagtaaacacacacgctgatctgatgcgggagagatatatgcaaacatatttgtatttactgttttgttttgcctcactaaagtgttgttggagcttggtatgttcacagttgaaatcactgaagtcacatggaacgtttggacaatgtgttttgtgccttatctggacaatgaccatcttgggaccattgctgtctgtagaggatgaggagcatttaatctaaaatattttagtttgtgttctgaaaattaacaggtctctgggatgacacaagtaattaataacagaacctactgtatatgaacacttaatgtgacatgtaatagtgaaatagtggtcctacattcacaaatgtgagccattattataagacccatgtgaacatgcaatttttatgatactaataataatggaataacaaattgctattactgttgtgtttgtgagagagaatcaaatcatatattctacacattttcttgatgatttactgaaatatttgtctacatgttccactgtcacaggtgctcagttttgctgcagtaatgctaaacacaatagatgtactttatgcaaaaaaaaaaaaaaaaaaagaaaaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000137011

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00073839 lncRNA downstream 492092 3931723 ~ 3951826 (-) True XLOC_037596
TCONS_00075285 lncRNA downstream 1048397 3358397 ~ 3395521 (-) False XLOC_037589
TCONS_00075286 lncRNA downstream 1048664 3374635 ~ 3395254 (-) False XLOC_037589
TCONS_00075287 lncRNA downstream 1048664 3394009 ~ 3395254 (-) True XLOC_037589
TCONS_00075284 lncRNA downstream 1163467 3265568 ~ 3280451 (-) True XLOC_037588
TCONS_00075288 lncRNA upstream 92371 4539475 ~ 4541821 (-) False XLOC_037600
TCONS_00075289 lncRNA upstream 418996 4866100 ~ 4867439 (-) True XLOC_037602
TCONS_00073852 lncRNA upstream 595983 5043087 ~ 5044088 (-) False XLOC_037603
TCONS_00075290 lncRNA upstream 597871 5044975 ~ 5045989 (-) True XLOC_037603
TCONS_00073869 lncRNA upstream 1967680 6414784 ~ 6502093 (-) True XLOC_037612
TCONS_00073840 mRNA downstream 368298 4024250 ~ 4075620 (-) True XLOC_037597
TCONS_00073838 mRNA downstream 425466 3901324 ~ 4018452 (-) False XLOC_037596
TCONS_00073836 mRNA downstream 485385 3898132 ~ 3958533 (-) False XLOC_037596
TCONS_00073837 mRNA downstream 508955 3900675 ~ 3934963 (-) False XLOC_037596
TCONS_00073834 mRNA downstream 577211 3699397 ~ 3866707 (-) False XLOC_037595
TCONS_00073842 mRNA upstream 31095 4478199 ~ 4506819 (-) False XLOC_037599
TCONS_00073843 mRNA upstream 31095 4478199 ~ 4511613 (-) True XLOC_037599
TCONS_00073844 mRNA upstream 91423 4538527 ~ 4606463 (-) False XLOC_037600
TCONS_00073845 mRNA upstream 118518 4565622 ~ 4598883 (-) True XLOC_037600
TCONS_00073846 mRNA upstream 283294 4730398 ~ 4754746 (-) False XLOC_037601
TCONS_00073830 other downstream 924207 3508318 ~ 3519711 (-) True XLOC_037592
TCONS_00073827 other downstream 947339 3490831 ~ 3496579 (-) True XLOC_037591
TCONS_00073809 other downstream 2106615 2330861 ~ 2337303 (-) True XLOC_037575
TCONS_00073808 other downstream 2166426 2226463 ~ 2277492 (-) False XLOC_037574
TCONS_00073801 other downstream 2487995 1953021 ~ 1955923 (-) True XLOC_037566
TCONS_00073868 other upstream 1962053 6409157 ~ 6409271 (-) True XLOC_037613
TCONS_00073875 other upstream 2270573 6717677 ~ 6717801 (-) True XLOC_037618
TCONS_00073897 other upstream 3075331 7522435 ~ 7539023 (-) True XLOC_037632
TCONS_00073901 other upstream 3194656 7641760 ~ 7655301 (-) True XLOC_037633
TCONS_00073935 other upstream 5296455 9743559 ~ 9805319 (-) False XLOC_037657

Expression Profile

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