RNA id: XM_039798049.1


Basic Information

Item Value
RNA id XM_039798049.1
length 617
RNA type mRNA
GC content 0.48
exon number 5
gene id mlnl
representative True

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 10499573 ~ 10502432 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTTCCCGGAGCATGGAGGAGAGTGCTTAAATGAGCCTGTTAAGAAGGGGGTGAGTATATAAAGGCTAACTGGGACAAGCTGACGCTCAGACCGGTGGAACTCTGCTCATCTTAAAGCACACTTCCTAAAACAACTGTCCAAAGCTGACACACCCCGACGGAGCAGAATGAGCATGCGTGGAGCAGTGGCTGGTTGCTTGGTGTTGGCGTGCCTGGTGGCGCTGCTGGCTGAGAGGACTGAGGGACACATCACCTTCTTCAGTCCAAAGGAGATGATGCTGATGAAGGAGAGAGAAGGTAGAAAGGACATGGAGCCTCGATCGAACGGTCAGTTTGAAGAGGATGCAGTCCAACAGCTTTCTCGGGTGGAACGTGGTGAAAATCCTGATGAAACAGTGGAGATTGGCGTCCGACTTTCACCCAAACAGCTAGATCATGTGGCTCTGGTGCTCAAAGAGATCATCCATGAGATAGTGGAGGAACATCAGAAAGcCAAGTAGCGAAGCCGAGGACACCATGTGATGAACGCTGTACAAATTCTTCAAAAAGCACCGAATGCcaaatgttttattgtgttttaattaATCAGTAAATAAAGAGAAGTGATTGTGCCACTTA

Function

GO:

id name namespace
GO:0031788 motilin receptor binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49950 lncRNA upstream 45842 10453485 ~ 10453731 (+) True G37238
TU49915 lncRNA upstream 64871 10402258 ~ 10434702 (+) False G37215
TU49917 lncRNA upstream 64871 10402258 ~ 10434702 (+) True G37215
TU49907 lncRNA upstream 103416 10387912 ~ 10396157 (+) False glrx
TU49897 lncRNA upstream 188410 10310067 ~ 10311163 (+) True G37198
TU50098 lncRNA downstream 24267 10526699 ~ 10526936 (+) True G37337
TU50106 lncRNA downstream 51600 10554032 ~ 10559006 (+) True G37342
TU50132 lncRNA downstream 158434 10660866 ~ 10661324 (+) True G37363
TU50136 lncRNA downstream 294547 10796979 ~ 10797424 (+) True G37367
TU50139 lncRNA downstream 407865 10910297 ~ 10915799 (+) True G37370
XM_039798041.1 mRNA upstream 9523 10469385 ~ 10490050 (+) False ubap2a
XM_039798043.1 mRNA upstream 9523 10469385 ~ 10490050 (+) False ubap2a
XM_039798042.1 mRNA upstream 9523 10469629 ~ 10490050 (+) True ubap2a
XM_039798044.1 mRNA upstream 31418 10453933 ~ 10468155 (+) True dcaf12
XM_039798045.1 mRNA upstream 48680 10443283 ~ 10450893 (+) True ubap1
XM_039797461.1 mRNA downstream 25948 10528380 ~ 10532087 (+) False aqp7
XM_039797460.1 mRNA downstream 25951 10528383 ~ 10532087 (+) True aqp7
XM_039797459.1 mRNA downstream 34021 10536453 ~ 10553381 (+) True kiaa1328
XM_039798630.1 mRNA downstream 441756 10944188 ~ 10966216 (+) True dnai1.2
XM_039798628.1 mRNA downstream 441756 10944188 ~ 10965556 (+) False dnai1.2
TU49895 other upstream 189577 10305187 ~ 10309996 (+) True G37197
unassigned_transcript_198 other upstream 1676842 8822660 ~ 8822731 (+) True trnae-cuc_13
unassigned_transcript_197 other upstream 1677265 8822237 ~ 8822308 (+) True trnae-cuc_12
unassigned_transcript_195 other upstream 1683176 8816325 ~ 8816397 (+) True trnar-acg_14
unassigned_transcript_192 other upstream 1691885 8807616 ~ 8807688 (+) True trnar-acg_13
TU50184 other downstream 494798 10997230 ~ 10998137 (+) False G37397
TU50347 other downstream 849646 11352078 ~ 11352387 (+) True G37525
TU50377 other downstream 888307 11390739 ~ 11394334 (+) False LOC120557336
TU50430 other downstream 1277746 11780178 ~ 11805394 (+) True G37597
TU50615 other downstream 1750634 12253066 ~ 12254974 (+) True G37714

Expression Profile