RNA id: XM_039798096.1


Basic Information

Item Value
RNA id XM_039798096.1
length 4273
RNA type mRNA
GC content 0.49
exon number 14
gene id dstyk
representative True

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17258191 ~ 17284292 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACCCCGCCCTTTCCTCTCCCAAAGTTTGGTTGTGTCGACTTTCTGTTTTGCATTGATTTGATTGCTTGGGCTCAGCTATGCGAGTTGTTTCGGACGGTGACACACCTCACCCTGCACCACCACTGACTCTCCTCTTCACCTTCGTCAATACCGAACGAGAAAACAGTTCGTTTGGTTGTGTCGCCGTCGCTCTACAGGGTGGAAGATGTCCGCTGGCTTCTCCGGTACAGAGCCAGTTTAGGAAGATCTTTTCCCACGGAGCCTCAACCAGAAAACGCCAACGTTTTTGCCGTGCTTAGGTTGTCATTAGGAGGCAACTCTTAAAGTTGGGCCCCCTCTTTTTAACACGGAGCTGTATGGCTGTGAAGCTGTGTCCTGGACTACTTATGTGGAGTTAAAGGCTATGTCTGTTGTGCCAGGCCAAGACGAGGACGGGCATGAGATGCCTTCTGGCTAGCAGCGCTAACGTTATCTGGACCACAGCTAGGTCGCAAAACACGCATTATATAGCTAACACATTAATCGGCAACACATCATTGTCGTGACTCGTGTTGGtatcttttgtttttaagacactGCTCAGTCTGCAGTCAGACAGTCGGTATTCACTAGAAATATGCCGAAATAGCGGTTACttggttaacgttagctaaccgtTAGAATCAGTCCTCGAACCAACAACCTTAAAGTTATCTGGTACGCGAGGCACGACGTTAAGCTAGCTAGCAGTGTTAGTCAGCTTCAACATCAtaacaaaaaaatccaaatgcCTAGCTAGCCTTTATtcactgacacaaacactgcaggGACTGTTGTCTGTCCAGCACTAATACACTAATGTTATTGATATGTTAAAACGGACTACAAGTGCATCCATTAACGATATTTAACAAAGCATAGCAAGTGGGTGGACAAACATGACTTCTAACTAACTAGCACGTAACGACAAAAGGAGCAGCTCAACTAAGACGTCCAATTTGAGGGTTTGACACCTGCTTAACCTTGTAAATCACAACAAGGAGAACACGAAGCTCAAACTGTTGACCATGGAGGGAaatgcacaacaacaacaacaacagcagcagcagaaaacaACTCCTTTAGCTCGGGAACTGACAAGGACATTTAACAGCTACAACAAACACACCATACAACTGAAGAAGAACCTGAAAGAGACTAATGCGTTCTTCCGGGAAATTAGGCAAAATTACAGCAATGCTTGTGCGTCGACCATGAGCTCGGAATCAGCTTCTTTTGAGGCAGCCCAGCTCAGCTGCATCTCTTTCCCCAGTCATGAGGAAGAGTTTCTGCGCAGCACTGTTGGCGCTTCCCCGTACATCCTGGTACTGGGCCAGGACTGTGCTGCCCGCTACCAGCTACTCAACTGCCTTCTGGGGGAAAGGCTGCTGCCACTGGGCCCTGAGGCAGGAGAGGCTTGTGAAGGAGTCCAGGGCACTGTCTGCAAGAGGAGGAAGCTGTGTTTCACCCATGGGAGACAGACACGGCTCAGCTTGGCGCTGCCTGGCCAGTATGAGCTGGTGCACCAGCTGGCAGCTAACTGTGGCCGCTGGGACACGGTGCCTCGGGAAGACCTGGAGATCCATGAGGAATGTGAAGACCCGGCTCACAGGCTAGCAGAGCTGGAGATCACTCTGTATCACCAACTGCTACAGGAAGCAAAGGTCATGGTGGTGCCTTGTCAAAGTGTCCAGCCCATAGAAGAGGCCCTCGAAGACTGCACGGTCCGCAGCATGATCCCCATCATACTCTATGCCATCAACCAGGACTCTCTAAGCACAGACCAGGTGGCTGAGCTCTGGAAGGTCAAAGAGATGCTCTCCTTTCCCATCTGTTTTATTCGTATCCCTGACACCGTGTCAGCAGCCTCCCCAGAACCTGGCCGCCGTGTGGAGAaggaaaaggagagggagaagagtGCACTCCATAAGCAGCTGCTCTCCCTCGGCTTTCTCAGTAGCCCGATAGGAAACTGCTCCTGTGGCGCCCCTACACAGATACCCGCCCCGGGTGCCAAGCCCCAGAGTGTGCTGTGTGAAGCTTTCGAAAGGCTGCACCGGTTGTTGGTGCCTTTCGCTCGCCAAGTGCTTCAAAACCAGCAGGTGGAAGCTGCCAACCTCCTTAATGGGGTTCACTGTCGCTGTCTAGATCTTTTCATCAACCAGGCCTTTGACATGCAGAGGGACCTGCAGATAACACCCCGCAGGCTGGAGTACACCCGTGACAAAGAGGGTGAACTCTTCACCTCCCTAATGGCCATCGCTAATCGCAAACAGGAAGAAATGAAGGAGATGATTGTGGAAACACTCGGCAGCATGAAAGAGCAGCTGCTGGAGGATGCTGCCAACCTGGAGTTTACAGATGTTATTGTAACATCTAATGGAGATCCTGTTACATCGAAGGAGATCAAATCTTGCATCCACCAGATCCAGGAGCTGATAGTGGTTCGTTTGAATCAGGCCGTGGCAAATAAGCTCATCAGCTCTGTGGACTATCTGAGGGAGAGCTTTGTAGGAACTCTGGAGCGATGTCTCAACAGTCTGGAGAAGTCGAACATGGAGTCTTCTGTTCACAATATCACTTCCAATCACCTAAAGCAGTTATTAAATGCTGCCTATCACGTGGAAGTCACCTTTCATTCAGGATCCTCTGTCACAAGACTCTTCTGGGAGCAAATTAAACAGATAATCCACAGGATAACGTTTGTGAACCCTCCTGCCATCACTCCAGAGTGGAAGCGGAAAGTGGCCCAGGACGCCATAGAAAGTCTGAGTGCCGCCAAACTGGCCAGAAGCATCTGCTCCCAGTTCAGAACCCGCCTCAACAGCTCCCATGAGGCCTTCGCAGCATCTCTGCGCCAGCTGGAGGAAGGGCATACGGGGCGTCTGGAGCGCACTGAGGACCTGTGGCTGCGTGTGAGGAAGGATCACGCCCCTCGGCTGGCCCGGCTGTCTCTGGAGAGCCGCTCCCTCAGAGATGTGCTGCTGCATGgcaAGCCTAAGCTCGGCAAAGAGTTGGGTCGGGGTCAGTACGGAGTTGTGTACTTGTGTGACAGCTGGGGCGGACGCTACCCATGTGCTTTAAAGTCTGTGGTACCGCCTGATGATAAACACTGGAACGATCTGGCTTTGGAGTTTCACTACACAAGGTCTCTGCCCAAGCATGAGCGGCTTGTCGACCTGCACGGCTCTGTGATCGATCACACTTACGGAGGCGGCTCCAGCATCGCTGTGCTGCTCATCATGGAGCGGCTGCACAGAGACCTCTATACAGGCTTGAAGGCTGGTTTATCACTGAGGGAGAGACTTCAGATCGCTCTGGATGTGGTGGAGGGGATACGCTTCCTGCACGGTCAGGGCCTCCTGCACAGAGACATAAAGCTAAAGAATgttctgTTGGACAAGCAAAATCGTGCAAAGATAACCGACCTGGGCTTCTGTAAGCCAGAGGCCATGATGTCTGGCAGCATCGTTGGAACCCCCATCCACATGGCCCCAGAGCTGTTTACAGGAAAGTATGATAACTCTGTGGATGTTTACGCCTTCGGTATCCTCTTCTGGTACCTCTGCACTGGTTCAGTAAAACTTCCAGAAGCCTTTGAGAAATGCTCCAGTAAGGACCAGCTCTGGAATAACgtaaaaaaagGAGCCAGACCCGAGCGGTTGCCCACTTTCGATGAGGAATGCTGGCAGCTGATGGAGGCCTGCTGGAACGGGGACCCTTCCCAGAGGCCCCTGCTTGGTATCGTGGAGCCCAGCCTGCAAAGCATCATGGTCCGGCTCTGCAACTGTGGTTCGGAACAGAAAAGCAGCAGCCTCGAGGACTCAAACTGAAAATACTCCAGACAAACTAACAAATGTGTGACAGGGATTTTGATCaggaaagtattttttttgtatttatgaaTAACGGAGATGAACAGTAGACCAATGACTGATGTTCGAGCTGTCCTCCTTTGTTGgatttacattatttatgaGGAGTTGATACAGACCAGAAGTTTGCAaatatgtgtgttttattgtttgttctTGTGTATTTGTATAAAACATGCTTTTGTCGTAGCTGCCGTGCTAATTGCTACTTTGTCATAGAATTGTTTCTAGATGCAAATTGTTTTAAACGTTGTTCATTCCcagtattatgaaaaaaatataaatatataaaagattAATTTTAGATTGTATTTAAACTGAACATGTCTGCATCTATAcaaatacatcttttttttttaataaaatgagcTGTTAAAACA

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K16288 DSTYK, RIPK5; dual serine/threonine and tyrosine protein kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU52816 lncRNA upstream 98955 17157903 ~ 17159236 (+) True G39358
TU52750 lncRNA upstream 175615 17080666 ~ 17082576 (+) True G39308
TU52745 lncRNA upstream 204240 17049797 ~ 17053951 (+) True G39304
TU52744 lncRNA upstream 204240 17050659 ~ 17053951 (+) False G39304
TU52742 lncRNA upstream 209826 17047935 ~ 17048365 (+) True G39302
TU52918 lncRNA downstream 4147 17288439 ~ 17289516 (+) True G39427
TU52924 lncRNA downstream 13700 17297992 ~ 17298192 (+) True G39433
TU52930 lncRNA downstream 22763 17307055 ~ 17307707 (+) True G39437
TU52926 lncRNA downstream 67414 17351706 ~ 17360942 (+) False G39434
TU52925 lncRNA downstream 70865 17355157 ~ 17357586 (+) True G39434
XM_039798139.1 mRNA upstream 18287 17235220 ~ 17239904 (+) True ccnd3
XM_039798122.1 mRNA upstream 23433 17229640 ~ 17234758 (+) True bysl
XM_039798113.1 mRNA upstream 42034 17209900 ~ 17216157 (+) True tmcc2
XM_039798166.1 mRNA downstream 87191 17371483 ~ 17377553 (+) True LOC120557637
XM_039798152.1 mRNA downstream 93887 17378179 ~ 17385774 (+) False nbl1
XM_039798153.1 mRNA downstream 95700 17379992 ~ 17385774 (+) True nbl1
XM_039798159.1 mRNA downstream 106245 17390537 ~ 17397524 (+) True LOC120557631
XM_039798116.1 mRNA downstream 141790 17426082 ~ 17436565 (+) True LOC120557606
TU52833 other upstream 59974 17193221 ~ 17198217 (+) False srsf3b
TU53107 other downstream 323638 17607930 ~ 17609216 (+) True G39581
XR_005639081.1 other downstream 609001 17893293 ~ 17893420 (+) True LOC120558252
XR_005638976.1 other downstream 620406 17904698 ~ 17926887 (+) False wnk2
TU53438 other downstream 905323 18189615 ~ 18193926 (+) False tusc2b
TU53439 other downstream 905323 18189615 ~ 18193926 (+) False tusc2b

Expression Profile