Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039798373.1 |
| length | 1188 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 1 |
| gene id | LOC120557769 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 4524321 ~ 4525508 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0001503 | ossification | biological_process |
| GO:0048015 | phosphatidylinositol-mediated signaling | biological_process |
| GO:0034080 | CENP-A containing nucleosome assembly | biological_process |
| GO:0045653 | negative regulation of megakaryocyte differentiation | biological_process |
| GO:0000723 | telomere maintenance | biological_process |
| GO:0000786 | nucleosome | cellular_component |
| GO:0005576 | extracellular region | cellular_component |
| GO:0015629 | actin cytoskeleton | cellular_component |
| GO:0005654 | nucleoplasm | cellular_component |
| GO:0005730 | nucleolus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| id | description |
|---|---|
| K11254 | H4; histone H4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48010 | lncRNA | upstream | 154100 | 4369919 ~ 4370221 (+) | True | G35834 |
| TU48009 | lncRNA | upstream | 155271 | 4368691 ~ 4369050 (+) | True | G35833 |
| TU47890 | lncRNA | upstream | 694380 | 3772611 ~ 3829941 (+) | True | G35739 |
| TU47892 | lncRNA | upstream | 732348 | 3790004 ~ 3791973 (+) | True | G35741 |
| TU47888 | lncRNA | upstream | 755933 | 3767852 ~ 3768388 (+) | True | G35737 |
| TU48146 | lncRNA | downstream | 79952 | 4605460 ~ 4610060 (+) | True | G35925 |
| TU48164 | lncRNA | downstream | 85030 | 4610538 ~ 4613004 (+) | True | G35941 |
| TU48165 | lncRNA | downstream | 90385 | 4615893 ~ 4617397 (+) | True | G35942 |
| TU48182 | lncRNA | downstream | 165547 | 4691055 ~ 4694565 (+) | True | G35958 |
| TU48271 | lncRNA | downstream | 274463 | 4799971 ~ 4800984 (+) | True | G36022 |
| XM_039799113.1 | mRNA | upstream | 497 | 4510544 ~ 4523824 (+) | True | LOC120558177 |
| XM_039799114.1 | mRNA | upstream | 6938 | 4510543 ~ 4517383 (+) | False | LOC120558177 |
| XM_039796486.1 | mRNA | upstream | 25227 | 4498585 ~ 4499094 (+) | True | LOC120556766 |
| XM_039796487.1 | mRNA | upstream | 26484 | 4496804 ~ 4497837 (+) | True | LOC120556767 |
| XM_039796530.1 | mRNA | upstream | 31153 | 4492593 ~ 4493168 (+) | True | LOC120556803 |
| XM_039798634.1 | mRNA | downstream | 6428 | 4531936 ~ 4532862 (+) | False | LOC120557928 |
| XM_039798959.1 | mRNA | downstream | 11963 | 4537471 ~ 4539747 (+) | True | LOC120558095 |
| XM_039797902.1 | mRNA | downstream | 31253 | 4556761 ~ 4557770 (+) | True | LOC120557506 |
| XM_039797900.1 | mRNA | downstream | 31718 | 4557226 ~ 4557775 (+) | False | LOC120557506 |
| XM_039797899.1 | mRNA | downstream | 33067 | 4558575 ~ 4559468 (+) | True | LOC120557505 |
| TU48128 | other | upstream | 26441 | 4487535 ~ 4497880 (+) | False | G35921 |
| TU48131 | other | upstream | 26441 | 4487535 ~ 4497880 (+) | False | G35921 |
| TU48140 | other | upstream | 26441 | 4487535 ~ 4497880 (+) | False | G35921 |
| TU48121 | other | upstream | 26441 | 4496695 ~ 4497880 (+) | False | G35921 |
| TU48126 | other | upstream | 30880 | 4487535 ~ 4493441 (+) | False | G35921 |
| TU48149 | other | downstream | 4325 | 4529833 ~ 4532861 (+) | True | LOC120557928 |
| TU48130 | other | downstream | 31196 | 4556704 ~ 4585475 (+) | False | G35921 |
| TU48133 | other | downstream | 31196 | 4556704 ~ 4585475 (+) | False | G35921 |
| TU48129 | other | downstream | 58731 | 4584239 ~ 4585475 (+) | False | G35921 |
| XR_005638977.1 | other | downstream | 386192 | 4911700 ~ 4934164 (+) | True | cdk5rap1 |
