RNA id: XR_005638908.1



Basic Information


Item Value
RNA id XR_005638908.1
length 656
lncRNA type inter_gene
GC content 0.47
exon number 3
gene id LOC120556889
representative True

Chromosome Information


Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 44840062 ~ 44841232 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TAGCAATATTATCACGCTGTCTCCTTTTCATTTCTTAATATATGTGAATGTATTCTTAGGGAGCCATTAGACCCGTTTCCCAGGCCAGTACCTCCCGGAGTATTGGCTGCCAGACTGACCCCCTTCCTAAAAGATCTGTTGGAACCCAACTATCCAAGGACACTCTTAAGACTCACGTCAGAAGCAGAGCTTCTCAGACAAGTGTGGTCTGTGAGAATGTGTGGTCTCCCCCACTTCTCACCTCAACACCCTTGAAGTCCCTTCCACCCAAAAAGAGGCCGCGACTGGAACTAGAGGAGGACGACGATGAATGGGAGGCCTCCATTGAGGCTACTGACCCTAATGACTCCACTTTCATTCAAAGTGTATCAATGACAACAGAGTCATCGACTGTATCACAAGCCTCACCACCATATGATGTACCTAAATATATTGTATACGAAAACTGCCTCCTCGAGTTGTTTGAGTTATGTCCAGTGTGCAGCTCCATGTGTGATGTCCGGAAAACTATACGTGGGACTTTCCTTGCTGTTGATCAGACATGCCACCGTTGTGAGTTCAACACACAGTGGAAGAGTCAACCGTTCATTGGAAGTACACCTGCAGGGAACATTCATCTCTCTGCGGCTGTATATTTTACAGGGACATCTTTCATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU61415 lncRNA upstream 15278 44823528 ~ 44824784 (+) True G45873
TU61402 lncRNA upstream 32659 44806710 ~ 44807403 (+) True G45863
TU61348 lncRNA upstream 95272 44742275 ~ 44744790 (+) False LOC120557302
TU61362 lncRNA upstream 125372 44714173 ~ 44714690 (+) True G45831
TU61095 lncRNA upstream 371071 44400478 ~ 44468991 (+) False G45635
XM_039796848.1 mRNA upstream 36709 44771904 ~ 44803353 (+) True LOC120556948
XM_039796849.1 mRNA upstream 36709 44772099 ~ 44803353 (+) False LOC120556948
XM_039797491.1 mRNA upstream 95272 44712415 ~ 44744790 (+) False LOC120557302
XM_039798367.1 mRNA upstream 131336 44670589 ~ 44708726 (+) False ralgapb
XM_039796703.1 mRNA downstream 84 44841316 ~ 44842831 (+) True LOC120556890
TU61350 other upstream 97867 44724807 ~ 44742195 (+) True LOC120557302
TU61241 other upstream 340766 44495576 ~ 44499296 (+) False tsen2
TU61239 other upstream 345343 44488999 ~ 44494719 (+) False tsen2
TU61117 other upstream 432613 44403903 ~ 44407449 (+) True G45647
TU61091 other upstream 478694 44360786 ~ 44361368 (+) False G45635

Expression Profile