Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005639015.1 |
| length | 375 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | LOC120557758 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 24452621 ~ 24454019 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:1901360 | organic cyclic compound metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU55632 | lncRNA | upstream | 1052 | 24436382 ~ 24451569 (+) | True | G41360 |
| TU55631 | lncRNA | upstream | 14921 | 24436382 ~ 24437700 (+) | False | G41360 |
| TU55633 | lncRNA | upstream | 14921 | 24436382 ~ 24437700 (+) | False | G41360 |
| TU55624 | lncRNA | upstream | 30738 | 24419201 ~ 24421883 (+) | True | G41354 |
| TU55615 | lncRNA | upstream | 175711 | 24276060 ~ 24276910 (+) | True | G41346 |
| TU55644 | lncRNA | downstream | 67580 | 24521599 ~ 24523607 (+) | True | G41368 |
| TU55653 | lncRNA | downstream | 86890 | 24540909 ~ 24542153 (+) | True | G41375 |
| TU55651 | lncRNA | downstream | 101506 | 24555525 ~ 24560318 (+) | False | bloc1s1 |
| TU55650 | lncRNA | downstream | 103641 | 24557660 ~ 24560318 (+) | True | bloc1s1 |
| TU55739 | lncRNA | downstream | 467617 | 24921636 ~ 24921851 (+) | True | G41441 |
| XM_039798350.1 | mRNA | upstream | 3252 | 24441312 ~ 24449369 (+) | True | gcnt7 |
| XM_039798916.1 | mRNA | upstream | 286802 | 23972393 ~ 24165819 (+) | True | LOC120558070 |
| XM_039798919.1 | mRNA | upstream | 286802 | 23987416 ~ 24165819 (+) | False | LOC120558070 |
| XM_039798918.1 | mRNA | upstream | 286802 | 24012529 ~ 24165819 (+) | False | LOC120558070 |
| XM_039798920.1 | mRNA | upstream | 286802 | 24024222 ~ 24165819 (+) | False | LOC120558070 |
| XM_039796931.1 | mRNA | downstream | 36840 | 24490859 ~ 24521308 (+) | True | eya2 |
| XM_039796930.1 | mRNA | downstream | 36840 | 24490859 ~ 24521308 (+) | False | eya2 |
| XM_039796508.1 | mRNA | downstream | 104532 | 24558551 ~ 24560002 (+) | False | bloc1s1 |
| XM_039799125.1 | mRNA | downstream | 107686 | 24561705 ~ 24567422 (+) | True | rdh5 |
| XM_039798771.1 | mRNA | downstream | 114472 | 24568491 ~ 24583147 (+) | True | gls2b |
| TU55524 | other | upstream | 691670 | 23748910 ~ 23760951 (+) | False | cbfa2t2 |
| TU55525 | other | upstream | 691670 | 23757758 ~ 23760951 (+) | False | cbfa2t2 |
| XR_005638988.1 | other | upstream | 2460822 | 21950376 ~ 21991799 (+) | False | itga7 |
| TU54259 | other | upstream | 4303931 | 20148104 ~ 20148690 (+) | True | G40353 |
| XR_005638939.1 | other | upstream | 4529072 | 19917889 ~ 19923549 (+) | False | abhd14b |
| TU56251 | other | downstream | 1814583 | 26268602 ~ 26273315 (+) | True | G41825 |
| TU56292 | other | downstream | 2088488 | 26542507 ~ 26548799 (+) | False | G41850 |
| TU56293 | other | downstream | 2088488 | 26542507 ~ 26548799 (+) | False | G41850 |
| XR_005639013.1 | other | downstream | 2199241 | 26653260 ~ 26698571 (+) | False | anks1ab |
| TU57106 | other | downstream | 4786394 | 29240413 ~ 29242253 (+) | True | G42449 |
