RNA id: TU69318



Basic Information


Item Value
RNA id TU69318
length 453
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G51902
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21819865 ~ 21820675 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TTTCTCAATAGTCTGCTGCTCCCTCATCAGCCTGCCAAGCTCCTTCTTCTTGTCCTTCAGCTCCTCCTCCACATGGTCCATCTTTTTACGGTCCTTATCAATCTCCTTGTTCCGCTGGCCCAGCTCTTTATTCAGCTTCTCAATCTCAGTCTCATTGTGGTACAGCTTGAAGAGCTGCAACTGAACACTAGCCCTGGCCACTTCGTCTTTCAGACGCTGGTACCGCTCAGCctcctccttctcttgcTTGGCTTCTTTGCGCTCAGCAGCAATGTTTTTCTTACGATGGTAATTGAACTGTGTGTCCTCCTCTGCTTTCACCATTTCCTTCTTCCTGCGTTCGTACTCCTGGGCCAGCTCTCCAGAACGTGAGATTTCCTCAAACAGAGCTGTCCGCTCCTTGGGGTTCTTCATGGCAATAGACTCCACAGCTCCCTGGAGGGACAATAAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU69314 lncRNA upstream 6234 21812612 ~ 21813631 (+) True G51900
TU69283 lncRNA upstream 99742 21717164 ~ 21720123 (+) False birc5b
TU69202 lncRNA upstream 241610 21577388 ~ 21578255 (+) True G51811
TU69145 lncRNA upstream 438616 21379001 ~ 21381249 (+) True G51761
TU69122 lncRNA upstream 443602 21376031 ~ 21376263 (+) True G51739
XR_005639358.1 lncRNA downstream 74666 21895341 ~ 21896456 (+) True LOC120559724
TU69342 lncRNA downstream 78449 21899124 ~ 21900231 (+) True G51921
TU69343 lncRNA downstream 79769 21900444 ~ 21901003 (+) True G51922
TU69348 lncRNA downstream 84380 21905055 ~ 21906248 (+) True G51927
TU69358 lncRNA downstream 93650 21914325 ~ 21914837 (+) True G51935
XM_039801688.1 mRNA upstream 11951 21783217 ~ 21807914 (+) True LOC120559721
XM_039801685.1 mRNA upstream 38915 21776471 ~ 21780950 (+) True tmem9
XM_039801686.1 mRNA upstream 38915 21776471 ~ 21780950 (+) False tmem9
XM_039801684.1 mRNA upstream 73148 21740522 ~ 21746717 (+) False zgc:153867
XM_039801674.1 mRNA downstream 2843 21823518 ~ 21827890 (+) True ribc1
XM_039801675.1 mRNA downstream 2843 21823518 ~ 21827890 (+) False ribc1
XM_039800925.1 mRNA downstream 202159 22022834 ~ 22028294 (+) True idh3g
XM_039800163.1 mRNA downstream 226088 22046763 ~ 22059909 (+) True avpr2aa
XM_039800162.1 mRNA downstream 226088 22046763 ~ 22059018 (+) False avpr2aa
TU69309 other upstream 31543 21783266 ~ 21788322 (+) False LOC120559721
TU69195 other upstream 260516 21558890 ~ 21559349 (+) True G51804
TU69117 other upstream 455435 21361290 ~ 21364430 (+) True G51734
TU69116 other upstream 456225 21361290 ~ 21363640 (+) False G51734
TU69094 other upstream 528903 21289588 ~ 21290962 (+) True G51716
TU69347 other downstream 82867 21903542 ~ 21904077 (+) True G51926
TU69454 other downstream 236046 22056721 ~ 22060645 (+) False avpr2aa
TU69473 other downstream 273230 22093905 ~ 22094890 (+) False LOC120558641
TU69718 other downstream 735654 22556329 ~ 22560328 (+) True G52210
XR_005639388.1 other downstream 741479 22562154 ~ 22562521 (+) True LOC120559933

Expression Profile