RNA id: TU69870



Basic Information


Item Value
RNA id TU69870
length 570
RNA type TUCP
GC content 0.42
exon number 4
gene id lamtor5
representative False

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22842044 ~ 22846938 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TCAGCTGATTTGAACCGGAAACTGAGGAAGCAGACAACCAAAACAAGTAATATTCATACACAGAATTTGACTTTTGCAGTTATTTACGATTGTTAATAATGGAGTCCACCCTCGAACAACATCTCGATGATACCATGAAAAATCCAGCAGTTGTCGGTGTGCTTTGCACGGATCAACAAGGACACAACCTGGGCTGCCGCGGCTCCCTGTCTGATGAACATGGCGGTGTTGTGTCAGTTTTGGCCAAACAAGCTGGCGCTCTTACTAAAGACCCAACAGACAGTCCGACTGTGTGTCTGGAATCTGAGTCAGGaAACATTCTGGTGAGGAGTCATGGCACCATCACAGTAGCAGTTCACAAGATAGCATCTTGAAGACAACACGACTCACTGAGGAATTTTTATTGTAAAGAAATGTACATGTCAACAGGAACATTAGTATGATCGCACAATCTGAATTGACTTTGAGAAAGATCTGGTGTTTCCACATGTCTGTTGTCCTTTCTATATTATCCCATAATTAAACATACATGGTCCTTTTCTAATAAATGAACTGAGATtcctttgagaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU69822 lncRNA upstream 79512 22750063 ~ 22762554 (+) True G52294
TU69815 lncRNA upstream 112511 22726597 ~ 22729555 (+) True G52288
TU69814 lncRNA upstream 112511 22726678 ~ 22729555 (+) False G52288
TU69812 lncRNA upstream 112555 22726597 ~ 22729511 (+) False G52288
TU69816 lncRNA upstream 112555 22726678 ~ 22729511 (+) False G52288
TU69880 lncRNA downstream 37111 22884049 ~ 22888687 (+) True G52342
TU69915 lncRNA downstream 144314 22991252 ~ 23068476 (+) False atxn7l2b
TU69923 lncRNA downstream 162239 23009177 ~ 23020008 (+) True G52379
TU69903 lncRNA downstream 173868 23020806 ~ 23023328 (+) True G52364
TU69904 lncRNA downstream 173868 23020806 ~ 23023328 (+) False G52364
XM_039801273.1 mRNA upstream 13518 22826631 ~ 22828548 (+) True LOC120559530
XM_039801272.1 mRNA upstream 13518 22826631 ~ 22828548 (+) False LOC120559530
XM_039800602.1 mRNA upstream 18423 22811870 ~ 22823643 (+) False LOC120559125
XM_039800601.1 mRNA upstream 18423 22812173 ~ 22823643 (+) False LOC120559125
XM_039800600.1 mRNA upstream 18423 22812178 ~ 22823643 (+) True LOC120559125
XM_039801832.1 mRNA downstream 1047 22847985 ~ 22877262 (+) False slc16a4
XM_039801830.1 mRNA downstream 1049 22847987 ~ 22877262 (+) True slc16a4
XM_039801831.1 mRNA downstream 1049 22847987 ~ 22877262 (+) False slc16a4
XM_039801414.1 mRNA downstream 72836 22919774 ~ 22942875 (+) True slc6a17
XM_039799925.1 mRNA downstream 184358 23031296 ~ 23033104 (+) True ngrn
XR_005639388.1 other upstream 279545 22562154 ~ 22562521 (+) True LOC120559933
TU69718 other upstream 281738 22556329 ~ 22560328 (+) True G52210
TU69473 other upstream 747176 22093905 ~ 22094890 (+) False LOC120558641
TU69454 other upstream 781421 22056721 ~ 22060645 (+) False avpr2aa
TU69347 other upstream 937989 21903542 ~ 21904077 (+) True G51926
TU70197 other downstream 912296 23759234 ~ 23765153 (+) False tmem201
TU70648 other downstream 2106504 24953442 ~ 24957330 (+) True G52871
TU70864 other downstream 2896672 25743610 ~ 25748317 (+) True tprg1l
TU70970 other downstream 3224647 26071585 ~ 26076664 (+) False G53096
TU71155 other downstream 3505522 26352460 ~ 26353463 (+) True G53232

Expression Profile