RNA id: TU70102



Basic Information


Item Value
RNA id TU70102
length 205
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G52509
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 23447353 ~ 23447557 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AAAGGTTAAAGCAAAGTTTTCCTATAAAACACTGGAATGATAACTACACCTGGGAggatacacttttaaggtttgcTATATGGTAAAATACTTACAAATAGGTTGTCATGTTGCAGTCTGCATTCCAGCATGTTTCCTGTCAGTCAGAGTAAAGGTCCTACAAAGCAGCCGTGGGGACAAACCTGCTGCTTCATATGAAAGACAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU70058 lncRNA upstream 172158 23265231 ~ 23275195 (+) True LOC120558323
TU70061 lncRNA upstream 172158 23265231 ~ 23275195 (+) False LOC120558323
XR_005639092.1 lncRNA upstream 172212 23265329 ~ 23275141 (+) False LOC120558323
XR_005639093.1 lncRNA upstream 172212 23265329 ~ 23275141 (+) False LOC120558323
TU70027 lncRNA upstream 200849 23221926 ~ 23246504 (+) True G52461
TU70174 lncRNA downstream 238795 23686352 ~ 23687016 (+) False G52569
TU70175 lncRNA downstream 238881 23686438 ~ 23687016 (+) False G52569
TU70181 lncRNA downstream 238881 23686438 ~ 23687361 (+) True G52569
TU70232 lncRNA downstream 341891 23789448 ~ 23790522 (+) True G52604
TU70233 lncRNA downstream 343922 23791479 ~ 23800868 (+) False ctnnbip1
XM_039800436.1 mRNA upstream 1588 23353958 ~ 23445765 (+) True rerea
XM_039800182.1 mRNA upstream 127669 23306704 ~ 23319684 (+) False eno1a
XM_039800181.1 mRNA upstream 127669 23308873 ~ 23319684 (+) False eno1a
XM_039800179.1 mRNA upstream 127669 23308873 ~ 23319684 (+) False eno1a
XM_039800180.1 mRNA upstream 127669 23311539 ~ 23319684 (+) True eno1a
XM_039801924.1 mRNA downstream 54765 23502322 ~ 23557887 (+) False samd11
XM_039801922.1 mRNA downstream 54766 23502323 ~ 23557887 (+) True samd11
XM_039801923.1 mRNA downstream 54896 23502453 ~ 23556452 (+) False samd11
XM_039801925.1 mRNA downstream 55788 23503345 ~ 23557887 (+) False samd11
XM_039801930.1 mRNA downstream 140824 23588381 ~ 23601648 (+) False klhl17
TU69870 other upstream 600415 22842066 ~ 22846938 (+) False lamtor5
XR_005639388.1 other upstream 884832 22562154 ~ 22562521 (+) True LOC120559933
TU69718 other upstream 887025 22556329 ~ 22560328 (+) True G52210
TU69473 other upstream 1352463 22093905 ~ 22094890 (+) False LOC120558641
TU69454 other upstream 1386708 22056721 ~ 22060645 (+) False avpr2aa
TU70197 other downstream 311677 23759234 ~ 23765153 (+) False tmem201
TU70648 other downstream 1505885 24953442 ~ 24957330 (+) True G52871
TU70864 other downstream 2296053 25743610 ~ 25748317 (+) True tprg1l
TU70970 other downstream 2624028 26071585 ~ 26076664 (+) False G53096
TU71155 other downstream 2904903 26352460 ~ 26353463 (+) True G53232

Expression Profile