RNA id: TCONS_00074049


Basic Information

Item Value
RNA id TCONS_00074049
length 777
RNA type processed_transcript
GC content 0.46
exon number 3
gene id XLOC_037710
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 15570343 ~ 15572163 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AACCGAAACCCCCTTTGCGAGATTCGCCGCATCTATACCTGATTTGCGTTCAAAAATGCCTGCTTAATTATTTCACAGTAGGAGCAAACATGCCTTAAGAAAAGGAGTACGTTTGAAACTTTAGTAACCATAAAAGGACGCCAGGTGGATGCTTTTCTACTCCAGGAAGCCGCAGCCTACGGCCTGAAGGAGGAAGAGGACGCGGTCAGTTTGAAATagctgaatcgATGACATCTTGAAAGCAGCGATACAGTTAAGAAGCCCATGTTTTGCTGTATCTTCACACAGCTGGGCCAGTTCTGCAGATGATCAGAGGGACTTCGCCATCATCACATCCCTCATTGCTGCAGTCAGACTGAAACAGGGCGGTGATGCATGGCAGTCCATGCCCGAGATACGGATGATGAAGAGACCACAGCAACATCTGGTCCAGATGAGGACACAAGGGCATGTGGACTGATGCAGGGTCTCGTTCAGTTCACTACAGGAGAACAGGAGTGGCTAAACTCAGTCCAGAACTGCTGCTGTCTTGCAGAGTTTAGTTGAAGTTGAttctaaactgtgcaggacaccagccgtccagaactgagtttgggcacccctgcattaCAGCATTTCCAAGATGCTGCTGTGGACTTCTTTACCCTCACCACACACACCaatctgcagatatttcagatcatacaaaacattaaaaaaaattcaaaaaacaaTGTCATTTTACTGCACAATGTGTCATTTGATTTCTGTAGTGCTAGTAATAAAATTATCCTACCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000145786

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00074964 lncRNA downstream 39624 15517348 ~ 15530719 (-) True XLOC_037709
TCONS_00074048 lncRNA downstream 145704 15398425 ~ 15424639 (-) True XLOC_037708
TCONS_00074040 lncRNA downstream 1217561 14303895 ~ 14352782 (-) True XLOC_037703
TCONS_00075323 lncRNA downstream 1217579 14303895 ~ 14352764 (-) False XLOC_037703
TCONS_00075322 lncRNA downstream 1217579 14303895 ~ 14352764 (-) False XLOC_037703
TCONS_00074965 lncRNA upstream 197106 15769269 ~ 15777687 (-) False XLOC_037712
TCONS_00074966 lncRNA upstream 197106 15769269 ~ 15778131 (-) False XLOC_037712
TCONS_00074967 lncRNA upstream 197320 15769483 ~ 15777644 (-) False XLOC_037712
TCONS_00074969 lncRNA upstream 203845 15776008 ~ 15777601 (-) False XLOC_037712
TCONS_00074968 lncRNA upstream 203845 15776008 ~ 15777601 (-) False XLOC_037712
TCONS_00074046 mRNA downstream 145704 15362300 ~ 15424639 (-) False XLOC_037708
TCONS_00074047 mRNA downstream 207787 15362401 ~ 15362556 (-) False XLOC_037708
TCONS_00074044 mRNA downstream 362214 15014891 ~ 15208129 (-) False XLOC_037707
TCONS_00074045 mRNA downstream 362214 15143117 ~ 15208129 (-) True XLOC_037707
TCONS_00074043 mRNA downstream 577613 14800641 ~ 14992730 (-) True XLOC_037706
TCONS_00074053 mRNA upstream 213952 15786115 ~ 15789526 (-) True XLOC_037713
TCONS_00074055 mRNA upstream 364053 15936216 ~ 16062938 (-) True XLOC_037715
TCONS_00074056 mRNA upstream 525649 16097812 ~ 16109001 (-) False XLOC_037716
TCONS_00074058 mRNA upstream 555046 16127209 ~ 16239130 (-) False XLOC_037717
TCONS_00074059 mRNA upstream 556876 16129039 ~ 16133263 (-) False XLOC_037717
TCONS_00074033 other downstream 1461463 14093241 ~ 14108880 (-) True XLOC_037700
TCONS_00074026 other downstream 1716944 13839742 ~ 13853399 (-) True XLOC_037696
TCONS_00074018 other downstream 2682485 12885752 ~ 12887858 (-) True XLOC_037687
TCONS_00073999 other downstream 2975620 12584643 ~ 12594723 (-) False XLOC_037682
TCONS_00073998 other downstream 2975626 12582266 ~ 12594717 (-) False XLOC_037682
TCONS_00074050 other upstream 113583 15685746 ~ 15689059 (-) True XLOC_037711
TCONS_00074051 other upstream 209885 15782048 ~ 15789364 (-) False XLOC_037713
TCONS_00074054 other upstream 326310 15898473 ~ 15899553 (-) False XLOC_037714
TCONS_00074065 other upstream 1251122 16823285 ~ 16824175 (-) True XLOC_037719
TCONS_00074071 other upstream 1843078 17415241 ~ 17417628 (-) False XLOC_037723

Expression Profile

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