RNA id: TU73104



Basic Information


Item Value
RNA id TU73104
length 201
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G54731
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 32675265 ~ 32675465 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TTGAGTCCCCTTAGAAGCTGGTAGAACAGGTATGTGATGATGCGATCAGTTAATCTCCGCCTCTTCATAATGTGGCCCAGATCCTGGGCTACTAATGGCATTACCATATAactagagagagaaagagaagagcgGGAAATAAGGAGAGTATAAAGACATAATCAACAcgtaaagtaggctacataaagtgGGTCTAAAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73097 lncRNA downstream 77772 32596572 ~ 32597493 (-) True G54724
TU73095 lncRNA downstream 82649 32590983 ~ 32592616 (-) False LOC120559593
TU73048 lncRNA downstream 265413 32409506 ~ 32409852 (-) True G54684
TU72980 lncRNA downstream 676193 31998533 ~ 31999072 (-) True G54631
TU72978 lncRNA downstream 682714 31992349 ~ 31992551 (-) True G54629
TU73106 lncRNA upstream 6697 32682162 ~ 32682516 (-) True G54733
TU73107 lncRNA upstream 7895 32683360 ~ 32686614 (-) True G54734
TU73108 lncRNA upstream 12740 32688205 ~ 32688638 (-) True G54735
TU73272 lncRNA upstream 291170 32966635 ~ 32967363 (-) False zgc:158296
XR_005639133.1 lncRNA upstream 498401 33173866 ~ 33183318 (-) True LOC120558525
XM_039801426.1 mRNA downstream 8806 32592538 ~ 32666459 (-) False LOC120559593
XM_039801424.1 mRNA downstream 8837 32592538 ~ 32666428 (-) False LOC120559593
XM_039801425.1 mRNA downstream 8837 32592538 ~ 32666428 (-) True LOC120559593
XM_039799272.1 mRNA downstream 88302 32570308 ~ 32586963 (-) True si:ch211-220i18.4
XM_039799271.1 mRNA downstream 88604 32570308 ~ 32586661 (-) False si:ch211-220i18.4
XM_039799643.1 mRNA upstream 13422 32688887 ~ 32694442 (-) True LOC120558593
XM_039799644.1 mRNA upstream 45368 32720833 ~ 32726627 (-) True krt8
XM_039801894.1 mRNA upstream 216800 32892265 ~ 32903713 (-) True tmem106c
XM_039801314.1 mRNA upstream 235293 32910758 ~ 32933014 (-) True sars1
XM_039801313.1 mRNA upstream 248385 32923850 ~ 32927539 (-) True LOC120559545
TU73036 other downstream 353313 32316960 ~ 32321952 (-) False LOC120558955
TU73035 other downstream 362487 32306922 ~ 32312778 (-) False LOC120558955
unassigned_transcript_235 other downstream 1448134 31227060 ~ 31227131 (-) True trnaq-uug_1
XR_005639347.1 other downstream 2609325 30008242 ~ 30065940 (-) False tafa5l
TU73146 other upstream 91892 32767357 ~ 32773486 (-) True G54756
TU73247 other upstream 204728 32880193 ~ 32887290 (-) True G54834
TU73607 other upstream 1348553 34024018 ~ 34127495 (-) False G55124
TU73620 other upstream 1412505 34087970 ~ 34093118 (-) True G55131
TU73610 other upstream 1442439 34117904 ~ 34127495 (-) False G55124

Expression Profile