RNA id: TU73741



Basic Information


Item Value
RNA id TU73741
length 510
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G55203
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 34557181 ~ 34557690 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTGTGGCAGAAAATCTTGTGGGGCTTGGAGTCATCTTGATGACAGTCTGCCTTGGCGTCAGTGTTTTGATGTTGACCATTTTATGTTAGAATCTTTAGCTGTCCATGTTGAGGATGATTGCTGCCCATTGTTTTCAGCTAATATACTACACCAGACTGGTCCCCTGAATCCTCTTCATCATAGGAAAATTCACAATCCGGATCGTCAATagcatcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacctaaatgggtgttgaaagtctccgggtcaaaatgacccgcaacatcatctttgtatacaaactctgaacagacattccactacacatcagtgtgtccagattttatgaacaagttcatgaccctaaatgaggaaatgtcatacaatttcatggagaaaaagataggttaaccagtattttggtcaacacaaaaacgcaaatgggtcaaattgacccttaACATAATATGAGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73718 lncRNA downstream 150011 34380065 ~ 34407170 (-) False G55190
TU73721 lncRNA downstream 150011 34380065 ~ 34407170 (-) True G55190
TU73727 lncRNA downstream 150011 34393313 ~ 34407170 (-) False G55190
TU73659 lncRNA downstream 290148 34266795 ~ 34267033 (-) True G55166
TU73627 lncRNA downstream 428385 34128238 ~ 34128796 (-) True G55137
TU73906 lncRNA upstream 272679 34830369 ~ 34878720 (-) True G55328
TU73923 lncRNA upstream 326718 34884408 ~ 34885590 (-) True G55343
TU73927 lncRNA upstream 505104 35062794 ~ 35066042 (-) False G55346
TU73929 lncRNA upstream 505104 35062794 ~ 35077065 (-) True G55346
TU73945 lncRNA upstream 511325 35069015 ~ 35085198 (-) True G55360
XM_039799951.1 mRNA downstream 181678 34333598 ~ 34375503 (-) False slco4a1
XM_039799952.1 mRNA downstream 181678 34333598 ~ 34375503 (-) True slco4a1
XM_039799950.1 mRNA downstream 203650 34333598 ~ 34353531 (-) False slco4a1
XM_039799249.1 mRNA downstream 266112 34236566 ~ 34291069 (-) True ntsr1
XM_039801847.1 mRNA downstream 391217 34134259 ~ 34165964 (-) False snphb
XM_039800655.1 mRNA upstream 232923 34790613 ~ 34842286 (-) False plagl2
XM_039800653.1 mRNA upstream 232923 34790613 ~ 34842286 (-) True plagl2
XM_039800654.1 mRNA upstream 232923 34790613 ~ 34841640 (-) False plagl2
XM_039800673.1 mRNA upstream 330095 34887785 ~ 34899218 (-) True LOC120559153
XM_039800672.1 mRNA upstream 330095 34887785 ~ 34899215 (-) False LOC120559153
TU73658 other downstream 266294 34290406 ~ 34290887 (-) False ntsr1
TU73607 other downstream 429686 34024018 ~ 34127495 (-) False G55124
TU73610 other downstream 429686 34117904 ~ 34127495 (-) False G55124
TU73620 other downstream 464063 34087970 ~ 34093118 (-) True G55131
TU73247 other downstream 1669891 32880193 ~ 32887290 (-) True G54834
XR_005639223.1 other upstream 712208 35269898 ~ 35277854 (-) True LOC120559165
XR_005639224.1 other upstream 712210 35269900 ~ 35277854 (-) False LOC120559165
XR_005639222.1 other upstream 712210 35269900 ~ 35277854 (-) False LOC120559165
TU74116 other upstream 846914 35404604 ~ 35409766 (-) True G55492
XR_005639221.1 other upstream 1329411 35887101 ~ 35898736 (-) False si:ch73-70k4.1

Expression Profile