RNA id: TU74192



Basic Information


Item Value
RNA id TU74192
length 443
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G55544
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 35569574 ~ 35574145 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTCAATCAACAACATAATGATTATATTAtgtattaaaaacataaatgttttaATTGTCTAACTGCCAATCATACCTGTGTCTTTCATCTTTTTGAGACGCCACAAAAACAGAGCTATTGGGAGTCCGACCATTAAATATATCACAAGCCCCCCCACAAAGATGCCGATCACAGCTCCTGAACTTTGTTCTCCACATTCAGCATCCGTTGAAGCAGTTCCTGGTTTTATCAGCTGAAGATCCAATGATTGACATCTGGAATGATAGAGGGACATTTTGACAGGACCATGTGTAGGGAACCATGCTGCTGTTGGAAGAGTTCAGGTGTGTCCATGTCTGATCTGAAGCTtcacttactgtgtgtgtggctgacaCGATGTCAATAATGTCCCATCAGAAAATGTTCCATCGCTGCAGTCAGAGCACTCAGTGTCCTTTAATGCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005639227.1 lncRNA downstream 14006 35553727 ~ 35555568 (-) True LOC120559181
TU74151 lncRNA downstream 19903 35530014 ~ 35549671 (-) True G55507
TU74161 lncRNA downstream 66551 35494550 ~ 35503023 (-) True G55514
XR_005639226.1 lncRNA downstream 121104 35432383 ~ 35448470 (-) True LOC120559180
TU74123 lncRNA downstream 151775 35415007 ~ 35417799 (-) True G55496
TU74141 lncRNA upstream 226 35574371 ~ 35686846 (-) False G55505
TU74140 lncRNA upstream 45363 35619508 ~ 35709461 (-) False G55505
TU74209 lncRNA upstream 60551 35634696 ~ 35665398 (-) True G55558
TU74216 lncRNA upstream 109666 35683811 ~ 35691837 (-) True G55564
TU74233 lncRNA upstream 251333 35825478 ~ 35826247 (-) True G55578
XM_039800461.1 mRNA downstream 185345 35311194 ~ 35384229 (-) True flna
XM_039800713.1 mRNA downstream 265559 35298496 ~ 35304015 (-) True emd
XM_039800711.1 mRNA downstream 282364 35286360 ~ 35287210 (-) True mrpl49
XM_039800701.1 mRNA downstream 291720 35269900 ~ 35277854 (-) False LOC120559165
XM_039800693.1 mRNA upstream 300477 35874622 ~ 35898736 (-) False si:ch73-70k4.1
XM_039800694.1 mRNA upstream 312095 35886240 ~ 35898736 (-) False si:ch73-70k4.1
XM_039800695.1 mRNA upstream 312956 35887101 ~ 35898736 (-) False si:ch73-70k4.1
XM_039800692.1 mRNA upstream 312956 35887101 ~ 35898736 (-) False si:ch73-70k4.1
XM_039801534.1 mRNA upstream 679031 36253176 ~ 36270025 (-) False LOC120559648
TU74116 other downstream 159808 35404604 ~ 35409766 (-) True G55492
XR_005639223.1 other downstream 291720 35269898 ~ 35277854 (-) True LOC120559165
XR_005639224.1 other downstream 291720 35269900 ~ 35277854 (-) False LOC120559165
XR_005639222.1 other downstream 291720 35269900 ~ 35277854 (-) False LOC120559165
TU73658 other downstream 1278687 34290406 ~ 34290887 (-) False ntsr1
XR_005639221.1 other upstream 312956 35887101 ~ 35898736 (-) False si:ch73-70k4.1
XR_005639240.1 other upstream 985244 36559389 ~ 36559959 (-) False LOC120559361
TU75206 other upstream 1107754 36681899 ~ 36724209 (-) True G56160
XR_005639341.1 other upstream 1152451 36726596 ~ 36744132 (-) False LOC120559655
TU75262 other upstream 1310720 36884865 ~ 36895490 (-) False rhoaa

Expression Profile