RNA id: TCONS_00007198



Basic Information


Item Value
RNA id TCONS_00007198
length 117
RNA type rRNA
GC content 0.55
exon number 1
gene id XLOC_003725
representative True

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 44024762 ~ 44024878 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


gtgcacagccatatcaccctgcagcacaaaaccggttactcactgaagctaagcagggctgagcctggtttgtacctggatgggagacccctagggaacactaggttgctgtgggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000174879

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00008697 lncRNA upstream 74102 43943882 ~ 43950660 (+) True XLOC_003724
TCONS_00008696 lncRNA upstream 201909 43821555 ~ 43822853 (+) True XLOC_003723
TCONS_00008693 lncRNA upstream 207406 43811629 ~ 43817356 (+) False XLOC_003722
TCONS_00008694 lncRNA upstream 207406 43813393 ~ 43817356 (+) False XLOC_003722
TCONS_00008695 lncRNA upstream 207406 43813706 ~ 43817356 (+) True XLOC_003722
TCONS_00008698 lncRNA downstream 138452 44163330 ~ 44196871 (+) True XLOC_003727
TCONS_00008430 lncRNA downstream 201322 44226200 ~ 44238527 (+) False XLOC_003728
TCONS_00008699 lncRNA downstream 277107 44301985 ~ 44303041 (+) True XLOC_003729
TCONS_00008700 lncRNA downstream 286456 44311334 ~ 44314410 (+) True XLOC_003730
TCONS_00008701 lncRNA downstream 292325 44317203 ~ 44318134 (+) False XLOC_003731
TCONS_00007197 mRNA upstream 237609 43751263 ~ 43787153 (+) True XLOC_003721
TCONS_00007196 mRNA upstream 281060 43740949 ~ 43743702 (+) True XLOC_003720
TCONS_00007195 mRNA upstream 311012 43661735 ~ 43713750 (+) True XLOC_003719
TCONS_00007191 mRNA upstream 566150 43419809 ~ 43458612 (+) False XLOC_003716
TCONS_00007192 mRNA upstream 569180 43431289 ~ 43455582 (+) True XLOC_003716
TCONS_00007199 mRNA downstream 110473 44135351 ~ 44138271 (+) True XLOC_003726
TCONS_00007200 mRNA downstream 201322 44226200 ~ 44447359 (+) False XLOC_003728
TCONS_00007201 mRNA downstream 211305 44236183 ~ 44442536 (+) True XLOC_003728
TCONS_00007202 mRNA downstream 275670 44300548 ~ 44309032 (+) False XLOC_003729
TCONS_00007207 mRNA downstream 331626 44356504 ~ 44363031 (+) False XLOC_003734
TCONS_00007182 other upstream 979813 43044826 ~ 43044949 (+) True XLOC_003709
TCONS_00007172 other upstream 1399275 42625371 ~ 42625487 (+) True XLOC_003703
TCONS_00007149 other upstream 2559526 41465107 ~ 41465236 (+) True XLOC_003680
TCONS_00007137 other upstream 2866834 41110669 ~ 41157928 (+) False XLOC_003675
TCONS_00007139 other upstream 2866836 41135609 ~ 41157926 (+) True XLOC_003675
TCONS_00007203 other downstream 299883 44324761 ~ 44326292 (+) False XLOC_003732
TCONS_00007204 other downstream 299883 44324761 ~ 44334911 (+) False XLOC_003732
TCONS_00007205 other downstream 303896 44328774 ~ 44335322 (+) True XLOC_003732
TCONS_00007206 other downstream 310788 44335666 ~ 44335780 (+) True XLOC_003733
TCONS_00007223 other downstream 826596 44851474 ~ 44851593 (+) True XLOC_003747