RNA id: TU75263



Basic Information


Item Value
RNA id TU75263
length 663
RNA type TUCP
GC content 0.53
exon number 5
gene id rhoaa
representative False

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 36884803 ~ 36895540 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGGGACTGTTAGGTCCGACAGGAAAACTAAAGAAAGGCGAGGATCTCTAATAAAACGGTAAAATAACGTTTACGGGACTAGCTACTCAGAATAAGACAAGGATGGCTGCAATCAGAAAGAAACTAGTGATAGTCGGCGATGGAGCCTGTGGCAAGACCTGTCTCCTCATAGTGTTCAGCAAAGATCAGTTCCCTGAGGTTTACGTGCCCACCGTGTTTGAAAACTACGTGGCAGATATTGAGGTGGATGGTAAACAGGTGGAGCTGGCTCTGTGGGACACAGCGGGGCAGGAGGATTACGACCGACTGAGGCCTCTCTCCTACCCAGACACAGACGTCATCCTCATGTGTTTCTCCGTTGACAGCCCTGACAGTTTGGAGAATATTCCGGAGAAGTGGACTCCTGAGGTCAAGCATTTCTGTCCCAACGTGCCCATCATTCTTGTGGGGAACAAGAAAGATCTGCGGAATGATGAGCACACGCGTCGAGAGTTGGCGAAGATGAAACAGGAACCGGTGAAGTTAGACGAGGCGAGGGACATGGCTAACCGGATCAACGCCTTCGGTTACTTGGAGTGCTCGGCCAAGACGAAGGACGGTGTGCGGGAGGTGTTTGAGATGGCCACCAGGGCGGCGCTGCAGGCCAAGAGGCGAGGCAAGAAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75264 lncRNA downstream 5706 36870769 ~ 36879159 (-) True G56213
TU75266 lncRNA downstream 86669 36797443 ~ 36798196 (-) True G56215
TU75244 lncRNA downstream 126214 36757955 ~ 36758651 (-) True G56197
TU75242 lncRNA downstream 128394 36756213 ~ 36756471 (-) True G56195
TU75238 lncRNA downstream 131811 36752757 ~ 36753054 (-) True G56191
TU75291 lncRNA upstream 15598 36911088 ~ 36946922 (-) True G56235
TU75302 lncRNA upstream 80104 36975594 ~ 36980336 (-) True G56245
TU75315 lncRNA upstream 129444 37024934 ~ 37025355 (-) True G56250
TU75335 lncRNA upstream 171175 37066665 ~ 37118456 (-) False G56265
TU75351 lncRNA upstream 207246 37102736 ~ 37118149 (-) True G56279
XM_039800964.1 mRNA downstream 18563 36850850 ~ 36866302 (-) True gmeb2
XM_039800296.1 mRNA downstream 80195 36780301 ~ 36804670 (-) True stk35
XM_039801554.1 mRNA downstream 140734 36723238 ~ 36744131 (-) True LOC120559655
XM_039801622.1 mRNA downstream 258896 36610137 ~ 36625969 (-) True lrif1
XM_039799296.1 mRNA downstream 278097 36599574 ~ 36606768 (-) False si:dkeyp-110g5.4
XM_039799933.1 mRNA upstream 7587 36903077 ~ 36952279 (-) False plod1a
XM_039799930.1 mRNA upstream 20538 36916028 ~ 36952278 (-) True plod1a
XM_039799932.1 mRNA upstream 20875 36916365 ~ 36952279 (-) False plod1a
XM_039800467.1 mRNA upstream 89395 36984885 ~ 37001139 (-) True phc2a
XM_039801690.1 mRNA upstream 158297 37053787 ~ 37061695 (-) True LOC120559725
XR_005639341.1 other downstream 140733 36726596 ~ 36744132 (-) False LOC120559655
TU75206 other downstream 160656 36681899 ~ 36724209 (-) True G56160
XR_005639240.1 other downstream 324906 36559389 ~ 36559959 (-) False LOC120559361
XR_005639221.1 other downstream 986129 35887101 ~ 35898736 (-) False si:ch73-70k4.1
TU74116 other downstream 1475099 35404604 ~ 35409766 (-) True G55492
TU75311 other upstream 93295 36988785 ~ 37001151 (-) False phc2a
TU75312 other upstream 93295 36988785 ~ 37001151 (-) False phc2a
TU75428 other upstream 477145 37372635 ~ 37373316 (-) True G56335
TU75491 other upstream 726434 37621924 ~ 37622981 (-) False G56376
TU75494 other upstream 726434 37621924 ~ 37622981 (-) False G56376

Expression Profile