RNA id: TU75315



Basic Information


Item Value
RNA id TU75315
length 219
lncRNA type inter_gene
GC content 0.53
exon number 3
gene id G56250
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 37024934 ~ 37025355 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


aaaaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagacccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagaccgtga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75302 lncRNA downstream 44598 36975594 ~ 36980336 (-) True G56245
TU75291 lncRNA downstream 78012 36911088 ~ 36946922 (-) True G56235
TU75264 lncRNA downstream 145775 36870769 ~ 36879159 (-) True G56213
TU75266 lncRNA downstream 226738 36797443 ~ 36798196 (-) True G56215
TU75244 lncRNA downstream 266283 36757955 ~ 36758651 (-) True G56197
TU75335 lncRNA upstream 41310 37066665 ~ 37118456 (-) False G56265
TU75351 lncRNA upstream 77381 37102736 ~ 37118149 (-) True G56279
TU75336 lncRNA upstream 91815 37117170 ~ 37118456 (-) True G56265
TU75368 lncRNA upstream 119979 37145334 ~ 37147442 (-) True G56291
TU75346 lncRNA upstream 205099 37230454 ~ 37230861 (-) True G56275
XM_039800467.1 mRNA downstream 23795 36984885 ~ 37001139 (-) True phc2a
XM_039799933.1 mRNA downstream 72655 36903077 ~ 36952279 (-) False plod1a
XM_039799932.1 mRNA downstream 72655 36916365 ~ 36952279 (-) False plod1a
XM_039799930.1 mRNA downstream 72656 36916028 ~ 36952278 (-) True plod1a
XM_039799935.1 mRNA downstream 129394 36884803 ~ 36895540 (-) False rhoaa
XM_039801690.1 mRNA upstream 28432 37053787 ~ 37061695 (-) True LOC120559725
XM_039801692.1 mRNA upstream 28432 37053787 ~ 37061681 (-) False LOC120559725
XM_039801689.1 mRNA upstream 28432 37053787 ~ 37061509 (-) False LOC120559725
XM_039800793.1 mRNA upstream 131013 37156368 ~ 37172204 (-) True tbc1d25
XM_039801458.1 mRNA upstream 195179 37220534 ~ 37254041 (-) True LOC120559612
TU75311 other downstream 23783 36988785 ~ 37001151 (-) False phc2a
TU75312 other downstream 23783 36988785 ~ 37001151 (-) False phc2a
TU75262 other downstream 129444 36884865 ~ 36895490 (-) False rhoaa
TU75263 other downstream 129444 36884865 ~ 36895490 (-) False rhoaa
XR_005639341.1 other downstream 280802 36726596 ~ 36744132 (-) False LOC120559655
TU75428 other upstream 347280 37372635 ~ 37373316 (-) True G56335
TU75491 other upstream 596569 37621924 ~ 37622981 (-) False G56376
TU75494 other upstream 596569 37621924 ~ 37622981 (-) False G56376
TU75503 other upstream 596569 37621924 ~ 37622981 (-) False G56376
TU75505 other upstream 660445 37685800 ~ 37686727 (-) False G56376

Expression Profile