RNA id: TU75346



Basic Information


Item Value
RNA id TU75346
length 322
lncRNA type intronic
GC content 0.46
exon number 2
gene id G56275
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 37230454 ~ 37230861 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gctgtgttgaagaaGAATTGAAACTAGCGactgagaccataaactcattatgaaaatgtttactgaggtaataaatcaagaagttagagagaatgcagctttaaggagtctcccccctgctggaagttagagagaatgcagctttaaggagtctcccccctgctggaagttagagagaatgcagctttaaggagtctcccccctgctggaagttagagagaacgcagctttaaggagtctcccccctgctggaagttagagagaatgcagctttaaggagtctcccccctgctggaagttagagagaacgcagctttaagga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75368 lncRNA downstream 83012 37145334 ~ 37147442 (-) True G56291
TU75335 lncRNA downstream 111998 37066665 ~ 37118456 (-) False G56265
TU75336 lncRNA downstream 111998 37117170 ~ 37118456 (-) True G56265
TU75351 lncRNA downstream 112305 37102736 ~ 37118149 (-) True G56279
TU75315 lncRNA downstream 205099 37024934 ~ 37025355 (-) True G56250
TU75386 lncRNA upstream 9056 37239917 ~ 37261393 (-) True G56305
TU75387 lncRNA upstream 9056 37239917 ~ 37261393 (-) False G56305
TU75395 lncRNA upstream 41532 37272393 ~ 37276725 (-) True G56308
TU75401 lncRNA upstream 56789 37287650 ~ 37287959 (-) True G56314
TU75402 lncRNA upstream 59287 37290148 ~ 37290506 (-) True G56315
XM_039800793.1 mRNA downstream 58250 37156368 ~ 37172204 (-) True tbc1d25
XM_039801690.1 mRNA downstream 168759 37053787 ~ 37061695 (-) True LOC120559725
XM_039801692.1 mRNA downstream 168773 37053787 ~ 37061681 (-) False LOC120559725
XM_039801689.1 mRNA downstream 168945 37053787 ~ 37061509 (-) False LOC120559725
XM_039800467.1 mRNA downstream 229315 36984885 ~ 37001139 (-) True phc2a
XM_039800328.1 mRNA upstream 66644 37297505 ~ 37329403 (-) True mthfr
XM_039800329.1 mRNA upstream 66644 37297505 ~ 37328918 (-) False mthfr
XM_039800787.1 mRNA upstream 661824 37892685 ~ 37900343 (-) False LOC120559227
XM_039800790.1 mRNA upstream 769647 38000508 ~ 38017411 (-) False LOC120559229
XM_039800476.1 mRNA upstream 843556 38074417 ~ 38077028 (-) True LOC120559054
TU75311 other downstream 229303 36988785 ~ 37001151 (-) False phc2a
TU75312 other downstream 229303 36988785 ~ 37001151 (-) False phc2a
TU75262 other downstream 334964 36884865 ~ 36895490 (-) False rhoaa
TU75263 other downstream 334964 36884865 ~ 36895490 (-) False rhoaa
XR_005639341.1 other downstream 486322 36726596 ~ 36744132 (-) False LOC120559655
TU75428 other upstream 141774 37372635 ~ 37373316 (-) True G56335
TU75491 other upstream 391063 37621924 ~ 37622981 (-) False G56376
TU75494 other upstream 391063 37621924 ~ 37622981 (-) False G56376
TU75503 other upstream 391063 37621924 ~ 37622981 (-) False G56376
TU75505 other upstream 454939 37685800 ~ 37686727 (-) False G56376

Expression Profile