RNA id: TU75395



Basic Information


Item Value
RNA id TU75395
length 232
lncRNA type inter_gene
GC content 0.63
exon number 2
gene id G56308
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 37272393 ~ 37276725 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CACCGTTTTCTCCCTCATCATCTGCTGGCTCTCCTCCTTCATCTCCTGCATGTCGTCGCTCACCTCGTCAGTGCCCCGCAGCTTCACCAGGAtgctGCGGGCTTTGCTCTCATCGTTGCAGTTGATGAGGACGTATCGGGGGCTCTCGGGGCAGAGCGGCAGCAGGACACACTGCAGCACGGACGGCAGCAGAGTGAACCCCAACAGGAGGGGCCACAGGGAGGCGTTCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75386 lncRNA downstream 11000 37239917 ~ 37261393 (-) True G56305
TU75387 lncRNA downstream 11000 37239917 ~ 37261393 (-) False G56305
TU75346 lncRNA downstream 41532 37230454 ~ 37230861 (-) True G56275
TU75368 lncRNA downstream 124951 37145334 ~ 37147442 (-) True G56291
TU75335 lncRNA downstream 153937 37066665 ~ 37118456 (-) False G56265
TU75401 lncRNA upstream 10925 37287650 ~ 37287959 (-) True G56314
TU75402 lncRNA upstream 13423 37290148 ~ 37290506 (-) True G56315
TU75403 lncRNA upstream 17822 37294547 ~ 37294852 (-) True G56316
TU75405 lncRNA upstream 33273 37309998 ~ 37310557 (-) True G56318
TU75419 lncRNA upstream 74414 37351139 ~ 37351573 (-) True G56328
XM_039801458.1 mRNA downstream 18352 37220534 ~ 37254041 (-) True LOC120559612
XM_039801459.1 mRNA downstream 18829 37220534 ~ 37253564 (-) False LOC120559612
XM_039801460.1 mRNA downstream 19039 37220534 ~ 37253354 (-) False LOC120559612
XM_039800793.1 mRNA downstream 100189 37156368 ~ 37172204 (-) True tbc1d25
XM_039801690.1 mRNA downstream 210698 37053787 ~ 37061695 (-) True LOC120559725
XM_039800328.1 mRNA upstream 20780 37297505 ~ 37329403 (-) True mthfr
XM_039800329.1 mRNA upstream 20780 37297505 ~ 37328918 (-) False mthfr
XM_039800787.1 mRNA upstream 615960 37892685 ~ 37900343 (-) False LOC120559227
XM_039800790.1 mRNA upstream 723783 38000508 ~ 38017411 (-) False LOC120559229
XM_039800476.1 mRNA upstream 797692 38074417 ~ 38077028 (-) True LOC120559054
TU75311 other downstream 271242 36988785 ~ 37001151 (-) False phc2a
TU75312 other downstream 271242 36988785 ~ 37001151 (-) False phc2a
TU75262 other downstream 376903 36884865 ~ 36895490 (-) False rhoaa
TU75263 other downstream 376903 36884865 ~ 36895490 (-) False rhoaa
XR_005639341.1 other downstream 528261 36726596 ~ 36744132 (-) False LOC120559655
TU75428 other upstream 95910 37372635 ~ 37373316 (-) True G56335
TU75491 other upstream 345199 37621924 ~ 37622981 (-) False G56376
TU75494 other upstream 345199 37621924 ~ 37622981 (-) False G56376
TU75503 other upstream 345199 37621924 ~ 37622981 (-) False G56376
TU75505 other upstream 409075 37685800 ~ 37686727 (-) False G56376

Expression Profile