RNA id: TU75402



Basic Information


Item Value
RNA id TU75402
length 359
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G56315
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 37290148 ~ 37290506 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggacaactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagcatccaaagagcaccatgtcatgggac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75401 lncRNA downstream 2189 37287650 ~ 37287959 (-) True G56314
TU75395 lncRNA downstream 13423 37272393 ~ 37276725 (-) True G56308
TU75386 lncRNA downstream 28755 37239917 ~ 37261393 (-) True G56305
TU75387 lncRNA downstream 28755 37239917 ~ 37261393 (-) False G56305
TU75346 lncRNA downstream 59287 37230454 ~ 37230861 (-) True G56275
TU75403 lncRNA upstream 4041 37294547 ~ 37294852 (-) True G56316
TU75405 lncRNA upstream 19492 37309998 ~ 37310557 (-) True G56318
TU75419 lncRNA upstream 60633 37351139 ~ 37351573 (-) True G56328
TU75421 lncRNA upstream 67920 37358426 ~ 37358816 (-) False G56330
TU75422 lncRNA upstream 67920 37358426 ~ 37408370 (-) True G56330
XM_039801458.1 mRNA downstream 36107 37220534 ~ 37254041 (-) True LOC120559612
XM_039801459.1 mRNA downstream 36584 37220534 ~ 37253564 (-) False LOC120559612
XM_039801460.1 mRNA downstream 36794 37220534 ~ 37253354 (-) False LOC120559612
XM_039800793.1 mRNA downstream 117944 37156368 ~ 37172204 (-) True tbc1d25
XM_039801690.1 mRNA downstream 228453 37053787 ~ 37061695 (-) True LOC120559725
XM_039800328.1 mRNA upstream 6999 37297505 ~ 37329403 (-) True mthfr
XM_039800329.1 mRNA upstream 6999 37297505 ~ 37328918 (-) False mthfr
XM_039800787.1 mRNA upstream 602179 37892685 ~ 37900343 (-) False LOC120559227
XM_039800790.1 mRNA upstream 710002 38000508 ~ 38017411 (-) False LOC120559229
XM_039800476.1 mRNA upstream 783911 38074417 ~ 38077028 (-) True LOC120559054
TU75311 other downstream 288997 36988785 ~ 37001151 (-) False phc2a
TU75312 other downstream 288997 36988785 ~ 37001151 (-) False phc2a
TU75262 other downstream 394658 36884865 ~ 36895490 (-) False rhoaa
TU75263 other downstream 394658 36884865 ~ 36895490 (-) False rhoaa
XR_005639341.1 other downstream 546016 36726596 ~ 36744132 (-) False LOC120559655
TU75428 other upstream 82129 37372635 ~ 37373316 (-) True G56335
TU75491 other upstream 331418 37621924 ~ 37622981 (-) False G56376
TU75494 other upstream 331418 37621924 ~ 37622981 (-) False G56376
TU75503 other upstream 331418 37621924 ~ 37622981 (-) False G56376
TU75505 other upstream 395294 37685800 ~ 37686727 (-) False G56376

Expression Profile