RNA id: TU75719



Basic Information


Item Value
RNA id TU75719
length 259
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G56504
representative False

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38255663 ~ 38378423 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGAGAGGGAACgtgttttattgatttattaatttattacagTTTTAATGAAACACCCTGAGACAGAAAACTGACTGAGAGGGAAGCAGCTACAGAGATatcagtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtatcagtgtgtgtgtctgtcattgtgtgtgtgtgtgtgtgtgtatcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU75766 lncRNA downstream 14436 38340299 ~ 38341070 (-) True G56526
TU75765 lncRNA downstream 14956 38340299 ~ 38340550 (-) False G56526
TU75758 lncRNA downstream 20703 38334374 ~ 38334803 (-) True G56522
TU75740 lncRNA downstream 21529 38270467 ~ 38333977 (-) True G56510
TU75738 lncRNA downstream 27415 38327317 ~ 38328091 (-) True G56509
TU75786 lncRNA upstream 42558 38420981 ~ 38423782 (-) True G56541
TU75797 lncRNA upstream 50793 38429216 ~ 38500711 (-) False G56544
TU75777 lncRNA upstream 59343 38437766 ~ 38439311 (-) True G56534
TU75795 lncRNA upstream 76918 38455341 ~ 38500711 (-) False G56544
TU75817 lncRNA upstream 101862 38480285 ~ 38481708 (-) True G56559
XM_039800481.1 mRNA downstream 2953 38343487 ~ 38352553 (-) True LOC120559059
XM_039800480.1 mRNA downstream 18600 38329266 ~ 38336906 (-) True LOC120559058
XM_039801825.1 mRNA downstream 149415 38193260 ~ 38206091 (-) True LOC120559803
XM_039800479.1 mRNA downstream 166714 38133222 ~ 38188792 (-) True fgd1
XM_039801587.1 mRNA downstream 236878 38083822 ~ 38118628 (-) True tfe3a
XM_039799719.1 mRNA upstream 130069 38508492 ~ 38531063 (-) True pcsk1nl
XM_039799720.1 mRNA upstream 160250 38538673 ~ 38567635 (-) True LOC120558637
XM_039799997.1 mRNA upstream 535297 38913720 ~ 38916360 (-) True LOC120558769
XM_039800156.1 mRNA upstream 954839 39333262 ~ 39348187 (-) True LOC120558856
XM_039799446.1 mRNA upstream 1087803 39466226 ~ 39628477 (-) True plxna3
TU75615 other downstream 185830 38073339 ~ 38169676 (-) False G56438
TU75620 other downstream 188236 38140044 ~ 38167270 (-) True G56441
TU75613 other downstream 225362 38121460 ~ 38130144 (-) True G56438
TU75608 other downstream 414958 37926194 ~ 37940548 (-) False G56436
TU75596 other downstream 455211 37882168 ~ 37900295 (-) True LOC120559227
TU75783 other upstream 26837 38405260 ~ 38406187 (-) True G56539
TU75784 other upstream 40859 38419282 ~ 38419860 (-) True G56540
TU75785 other upstream 40859 38419282 ~ 38513859 (-) False G56540
TU75815 other upstream 99227 38477650 ~ 38479164 (-) True G56557
TU75793 other upstream 121231 38499654 ~ 38500711 (-) False G56544

Expression Profile


TU75719 Expression in all Baseline Samples

Bar chart with 13 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
End of interactive chart.

TU75719 Expression in each Bioproject

Bar chart with 4 bars.
TU75719 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
End of interactive chart.