RNA id: TU75729



Basic Information


Item Value
RNA id TU75729
length 503
RNA type TUCP
GC content 0.47
exon number 4
gene id G56504
representative False

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38255663 ~ 38378423 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGAGAGGGAACgtgttttattgatttattaatttattacagTTTTAATGAAACACCCTGAGACAGAAAACTGACTGAGAGGGAAGCAGCTACAGAGATatcagtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctacaggtgtGTGTTAGCTGCTCCTGATCCTTCACATTCGATGATGAAGGACTCTTCGCTGCTCAGCTCGTCTTCACATTTAGTTATCGTGAACTTTGcCTGTGTGAGCTGCTCGGCCATGTGGatggctgtctgtgtgtgcagtgtgacGGCGCCGGTTCTGATCCGAGACGTTCCCTTCGCCAGAGCCATGAAGATGATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75741 lncRNA downstream 10844 38272503 ~ 38363799 (-) True G56511
TU75769 lncRNA downstream 16995 38355331 ~ 38357648 (-) True G56528
TU75766 lncRNA downstream 33573 38340299 ~ 38341070 (-) True G56526
TU75765 lncRNA downstream 34093 38340299 ~ 38340550 (-) False G56526
TU75758 lncRNA downstream 39840 38334374 ~ 38334803 (-) True G56522
TU75786 lncRNA upstream 42558 38420981 ~ 38423782 (-) True G56541
TU75797 lncRNA upstream 50793 38429216 ~ 38500711 (-) False G56544
TU75777 lncRNA upstream 59343 38437766 ~ 38439311 (-) True G56534
TU75795 lncRNA upstream 76918 38455341 ~ 38500711 (-) False G56544
TU75817 lncRNA upstream 101862 38480285 ~ 38481708 (-) True G56559
XM_039800481.1 mRNA downstream 22090 38343487 ~ 38352553 (-) True LOC120559059
XM_039800480.1 mRNA downstream 37737 38329266 ~ 38336906 (-) True LOC120559058
XM_039801825.1 mRNA downstream 168552 38193260 ~ 38206091 (-) True LOC120559803
XM_039800479.1 mRNA downstream 185851 38133222 ~ 38188792 (-) True fgd1
XM_039801587.1 mRNA downstream 256015 38083822 ~ 38118628 (-) True tfe3a
XM_039799719.1 mRNA upstream 130069 38508492 ~ 38531063 (-) True pcsk1nl
XM_039799720.1 mRNA upstream 160250 38538673 ~ 38567635 (-) True LOC120558637
XM_039799997.1 mRNA upstream 535297 38913720 ~ 38916360 (-) True LOC120558769
XM_039800156.1 mRNA upstream 954839 39333262 ~ 39348187 (-) True LOC120558856
XM_039799446.1 mRNA upstream 1087803 39466226 ~ 39628477 (-) True plxna3
TU75615 other downstream 204967 38073339 ~ 38169676 (-) False G56438
TU75620 other downstream 207373 38140044 ~ 38167270 (-) True G56441
TU75613 other downstream 244499 38121460 ~ 38130144 (-) True G56438
TU75608 other downstream 434095 37926194 ~ 37940548 (-) False G56436
TU75596 other downstream 474348 37882168 ~ 37900295 (-) True LOC120559227
TU75783 other upstream 26837 38405260 ~ 38406187 (-) True G56539
TU75784 other upstream 40859 38419282 ~ 38419860 (-) True G56540
TU75785 other upstream 40859 38419282 ~ 38513859 (-) False G56540
TU75815 other upstream 99227 38477650 ~ 38479164 (-) True G56557
TU75793 other upstream 121231 38499654 ~ 38500711 (-) False G56544

Expression Profile