RNA id: TU75883


Basic Information

Item Value
RNA id TU75883
length 528
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G56598
representative False

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39113695 ~ 39202426 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CATCCCAAacgataaaataaaataaaacaaacttatattattaataacaaCAGTAATAATCATCAATCATTAAGAGGATTAAGTATGACAATTctcaactttcttttttttatctcctttttttatttgttgctcTTTCTCTATGATGATATTGGTCGTGGTCGATTAAACATGCAGCTAAATAAGtccaatgatgatgatgatggtgaatGAGTGGGGAaggaagagggggaggaagaggaggagttagagagggagagagagggagaaagagagaaagagggggagagagggagggagagagagagagatagacagagagggaaagagagcgagagagggagagagaaagagggagagagagaaagggggagagagagagggagagaaaaggagagagagggagagagagggagagaagtgagggagagagagagagagggagagagaaagtgagaaggagagagagacagaaagagagagagagacagagagagagagacagagagagagagagagagagagaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU75993 lncRNA downstream 3106 39110104 ~ 39110675 (-) True G56683
TU75974 lncRNA downstream 22641 39068581 ~ 39091140 (-) False G56666
TU75878 lncRNA upstream 10930 39198738 ~ 39202426 (-) True G56598
TU76009 lncRNA upstream 27452 39215260 ~ 39279097 (-) True G56696
TU75909 lncRNA upstream 29200 39217008 ~ 39248802 (-) True G56616
TU75885 lncRNA upstream 49836 39237644 ~ 39242738 (-) True G56599
TU75887 lncRNA upstream 49836 39237644 ~ 39242738 (-) False G56599
XM_039799997.1 mRNA downstream 197421 38913720 ~ 38916360 (-) True LOC120558769
XM_039799720.1 mRNA downstream 546146 38538673 ~ 38567635 (-) True LOC120558637
XM_039799719.1 mRNA downstream 582718 38508492 ~ 38531063 (-) True pcsk1nl
XM_039800481.1 mRNA downstream 761228 38343487 ~ 38352553 (-) True LOC120559059
XM_039800480.1 mRNA downstream 776875 38329266 ~ 38336906 (-) True LOC120559058
XM_039800156.1 mRNA upstream 145454 39333262 ~ 39348187 (-) True LOC120558856
XM_039799446.1 mRNA upstream 278418 39466226 ~ 39628477 (-) True plxna3
XM_039799936.1 mRNA upstream 852177 40039985 ~ 40132853 (-) True gripap1
XM_039799937.1 mRNA upstream 852177 40039985 ~ 40132852 (-) False gripap1
XM_039799943.1 mRNA upstream 1063748 40251556 ~ 40254265 (-) True LOC120558739
TU75903 other downstream 156581 38955694 ~ 38957200 (-) True LOC120558774
XR_005639179.1 other downstream 197421 38913720 ~ 38916360 (-) False LOC120558769
TU75943 other downstream 210813 38902484 ~ 38902968 (-) True G56645
TU75889 other downstream 308593 38794972 ~ 38805188 (-) False G56600
TU75873 other upstream 10930 39198738 ~ 39202426 (-) False G56598
TU75880 other upstream 10930 39198738 ~ 39202426 (-) False G56598
TU75886 other upstream 49836 39237644 ~ 39242738 (-) False G56599
TU76064 other upstream 209957 39397765 ~ 39459874 (-) False G56718
TU76067 other upstream 321744 39509552 ~ 39534640 (-) False plxna3

Expression Profile