RNA id: TU75890



Basic Information


Item Value
RNA id TU75890
length 590
RNA type TUCP
GC content 0.46
exon number 3
gene id G56600
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38794972 ~ 38805188 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGGAAACCCCTGGGAGCACCTTccctttgtctgtgtgtatgtgtgtgtgtgtgtgtgtgtatgtgtgtgtatgtgtgtgtatgtgtgtgtatgtgtgtgtgtgtgtgtctgtgtgtgtgtgtatgtatgtgtgtgtgtgtttgtatatatgtgtgtgtgtgtctgtgtgtctgtatgtgtgtgtgtgtatgtgtgtctgtgtgtctgtatgtgtgtgtgtgtatgtgtgtctgtgtgtctgtatgtgtgtgtgtgtatgtgtgtctgtgtgtctgtatgtgtgtgtgtgtttgtatgtgtgtgtgtctgtgtgtctgtatgtgtgtgtgtgtgtgtctgtatgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtatgtgtgtgtgtgtgtgtctgtatgtgtgtgtatgtgtgtgtgtgtgtgtctgtatgtgtgtgtatgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtatgtcacaCTGTCAGTGTGCCACTAGGGGGCAGAGTTGGACATGGAGTCCACAGAGTTTACACTGGAAGACTGCACACGGCTGTGGGAGATGGACACCTCTGGGtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75905 lncRNA downstream 110522 38690812 ~ 38693629 (-) True G56612
TU75911 lncRNA downstream 111772 38679800 ~ 38692379 (-) True G56618
TU75924 lncRNA downstream 130784 38673079 ~ 38673367 (-) True G56631
TU75864 lncRNA downstream 146542 38654975 ~ 38657609 (-) True G56593
TU75847 lncRNA downstream 180212 38621818 ~ 38623939 (-) True G56579
TU75898 lncRNA upstream 2024 38807212 ~ 38812847 (-) True G56605
TU75916 lncRNA upstream 12427 38817615 ~ 38968057 (-) True G56623
TU75904 lncRNA upstream 17086 38822274 ~ 38899991 (-) True G56611
TU75932 lncRNA upstream 22178 38827366 ~ 38828144 (-) True G56638
TU75931 lncRNA upstream 22612 38827800 ~ 38828144 (-) False G56638
XM_039799720.1 mRNA downstream 236516 38538673 ~ 38567635 (-) True LOC120558637
XM_039799719.1 mRNA downstream 273088 38508492 ~ 38531063 (-) True pcsk1nl
XM_039800481.1 mRNA downstream 451598 38343487 ~ 38352553 (-) True LOC120559059
XM_039800480.1 mRNA downstream 467245 38329266 ~ 38336906 (-) True LOC120559058
XM_039801825.1 mRNA downstream 598060 38193260 ~ 38206091 (-) True LOC120559803
XM_039799997.1 mRNA upstream 108532 38913720 ~ 38916360 (-) True LOC120558769
XM_039800156.1 mRNA upstream 528074 39333262 ~ 39348187 (-) True LOC120558856
XM_039799446.1 mRNA upstream 661038 39466226 ~ 39628477 (-) True plxna3
XM_039799936.1 mRNA upstream 1234797 40039985 ~ 40132853 (-) True gripap1
XM_039799937.1 mRNA upstream 1234797 40039985 ~ 40132852 (-) False gripap1
TU75859 other downstream 158702 38642354 ~ 38645449 (-) True G56590
TU75822 other downstream 272394 38531252 ~ 38531757 (-) True G56564
TU75793 other downstream 303440 38499654 ~ 38500711 (-) False G56544
TU75800 other downstream 303440 38500032 ~ 38500711 (-) False G56544
TU75815 other downstream 324987 38477650 ~ 38479164 (-) True G56557
TU75943 other upstream 97296 38902484 ~ 38902968 (-) True G56645
XR_005639179.1 other upstream 108532 38913720 ~ 38916360 (-) False LOC120558769
TU75903 other upstream 150506 38955694 ~ 38957200 (-) True LOC120558774
TU75873 other upstream 393550 39198738 ~ 39202426 (-) False G56598
TU75880 other upstream 393550 39198738 ~ 39202426 (-) False G56598

Expression Profile