RNA id: TU75933



Basic Information


Item Value
RNA id TU75933
length 257
lncRNA type inter_gene
GC content 0.67
exon number 2
gene id G56639
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38830085 ~ 38830440 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gaggaggtctcggggaagacccaggactaggtggaggcacgtccagctgggaggaggtctcggggaagacccaggactaggtggagggacgaccagctgggaggaggcctcggggaagacccaggactaggtggagggacgtccagctgggaggaggcctcggggaagacccaggactaggtggagggacgtccagctgggaggaggcctcggggaagacccaggactaggtggagggacgtccagctgggaggagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75932 lncRNA downstream 1941 38827366 ~ 38828144 (-) True G56638
TU75931 lncRNA downstream 1941 38827800 ~ 38828144 (-) False G56638
TU75898 lncRNA downstream 17238 38807212 ~ 38812847 (-) True G56605
TU75914 lncRNA downstream 23176 38802564 ~ 38806909 (-) True G56621
TU75905 lncRNA downstream 136456 38690812 ~ 38693629 (-) True G56612
TU75901 lncRNA upstream 699 38831139 ~ 38901909 (-) True G56608
TU75934 lncRNA upstream 32549 38862989 ~ 38866245 (-) True G56640
TU75936 lncRNA upstream 44382 38874822 ~ 38899085 (-) True G56642
TU75939 lncRNA upstream 59881 38890321 ~ 38989735 (-) True G56644
TU75940 lncRNA upstream 59881 38890321 ~ 38977584 (-) False G56644
XM_039799720.1 mRNA downstream 262450 38538673 ~ 38567635 (-) True LOC120558637
XM_039799719.1 mRNA downstream 299022 38508492 ~ 38531063 (-) True pcsk1nl
XM_039800481.1 mRNA downstream 477532 38343487 ~ 38352553 (-) True LOC120559059
XM_039800480.1 mRNA downstream 493179 38329266 ~ 38336906 (-) True LOC120559058
XM_039801825.1 mRNA downstream 623994 38193260 ~ 38206091 (-) True LOC120559803
XM_039799997.1 mRNA upstream 83280 38913720 ~ 38916360 (-) True LOC120558769
XM_039800156.1 mRNA upstream 502822 39333262 ~ 39348187 (-) True LOC120558856
XM_039799446.1 mRNA upstream 635786 39466226 ~ 39628477 (-) True plxna3
XM_039799936.1 mRNA upstream 1209545 40039985 ~ 40132853 (-) True gripap1
XM_039799937.1 mRNA upstream 1209545 40039985 ~ 40132852 (-) False gripap1
TU75889 other downstream 24897 38794972 ~ 38805188 (-) False G56600
TU75890 other downstream 24897 38804151 ~ 38805188 (-) True G56600
TU75859 other downstream 184636 38642354 ~ 38645449 (-) True G56590
TU75822 other downstream 298328 38531252 ~ 38531757 (-) True G56564
TU75800 other downstream 329374 38500032 ~ 38500711 (-) False G56544
TU75943 other upstream 72044 38902484 ~ 38902968 (-) True G56645
XR_005639179.1 other upstream 83280 38913720 ~ 38916360 (-) False LOC120558769
TU75903 other upstream 125254 38955694 ~ 38957200 (-) True LOC120558774
TU75873 other upstream 368298 39198738 ~ 39202426 (-) False G56598
TU75880 other upstream 368298 39198738 ~ 39202426 (-) False G56598

Expression Profile