RNA id: TU75940



Basic Information


Item Value
RNA id TU75940
length 227
lncRNA type sense_over
GC content 0.52
exon number 3
gene id G56644
representative False

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38890321 ~ 38989735 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ccctctctctctctgtctctctctgtctctctctctctctctctgtctctctctctctctctctctctctctgtctctcgctcactctctctctgtctgtctgtctgtctgtctgtctctctctcactctgtctctctctctctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctctctctctgcctctctgtctctgtgtgaggcAGGTTGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75934 lncRNA downstream 24076 38862989 ~ 38866245 (-) True G56640
TU75919 lncRNA downstream 33627 38794261 ~ 38856694 (-) True G56626
TU75933 lncRNA downstream 59881 38830085 ~ 38830440 (-) True G56639
TU75932 lncRNA downstream 62177 38827366 ~ 38828144 (-) True G56638
TU75931 lncRNA downstream 62177 38827800 ~ 38828144 (-) False G56638
TU75961 lncRNA upstream 22338 38999922 ~ 39000255 (-) True G56660
TU75965 lncRNA upstream 45328 39022912 ~ 39040238 (-) True G56664
TU75966 lncRNA upstream 49548 39027132 ~ 39067926 (-) True G56665
TU75979 lncRNA upstream 70564 39048148 ~ 39048870 (-) True G56670
TU75968 lncRNA upstream 89326 39066910 ~ 39067926 (-) False G56665
XM_039799720.1 mRNA downstream 322686 38538673 ~ 38567635 (-) True LOC120558637
XM_039799719.1 mRNA downstream 359258 38508492 ~ 38531063 (-) True pcsk1nl
XM_039800481.1 mRNA downstream 537768 38343487 ~ 38352553 (-) True LOC120559059
XM_039800480.1 mRNA downstream 553415 38329266 ~ 38336906 (-) True LOC120559058
XM_039801825.1 mRNA downstream 684230 38193260 ~ 38206091 (-) True LOC120559803
XM_039800156.1 mRNA upstream 355678 39333262 ~ 39348187 (-) True LOC120558856
XM_039799446.1 mRNA upstream 488642 39466226 ~ 39628477 (-) True plxna3
XM_039799936.1 mRNA upstream 1062401 40039985 ~ 40132853 (-) True gripap1
XM_039799937.1 mRNA upstream 1062401 40039985 ~ 40132852 (-) False gripap1
XM_039799943.1 mRNA upstream 1273972 40251556 ~ 40254265 (-) True LOC120558739
TU75889 other downstream 85133 38794972 ~ 38805188 (-) False G56600
TU75890 other downstream 85133 38804151 ~ 38805188 (-) True G56600
TU75859 other downstream 244872 38642354 ~ 38645449 (-) True G56590
TU75822 other downstream 358564 38531252 ~ 38531757 (-) True G56564
TU75800 other downstream 389610 38500032 ~ 38500711 (-) False G56544
TU75873 other upstream 221154 39198738 ~ 39202426 (-) False G56598
TU75880 other upstream 221154 39198738 ~ 39202426 (-) False G56598
TU75886 other upstream 260060 39237644 ~ 39242738 (-) False G56599
TU76064 other upstream 420181 39397765 ~ 39459874 (-) False G56718
TU76067 other upstream 531968 39509552 ~ 39534640 (-) False plxna3

Expression Profile