RNA id: TU75994



Basic Information


Item Value
RNA id TU75994
length 596
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G56684
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39118977 ~ 39121113 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gacggttgggtttaggtaaagaagaacaggacagttgggtttaggagaagaagaacgggacagttgggtttaggaaaagaagaacgggacagttgggtttaggagaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgtgtttaggtaaagaagaacaggacaattgggtttaggtaaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttaggtaaagaagaacaggacagttgggtttaggtaaagaagaacgggacggttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75993 lncRNA downstream 9611 39110104 ~ 39110675 (-) True G56683
TU75974 lncRNA downstream 29146 39068581 ~ 39091140 (-) False G56666
TU75877 lncRNA upstream 64017 39185130 ~ 39187808 (-) False G56598
TU75881 lncRNA upstream 64017 39185130 ~ 39202426 (-) False G56598
TU75878 lncRNA upstream 77625 39198738 ~ 39202426 (-) True G56598
TU76009 lncRNA upstream 94147 39215260 ~ 39279097 (-) True G56696
TU75909 lncRNA upstream 95895 39217008 ~ 39248802 (-) True G56616
XM_039799997.1 mRNA downstream 203926 38913720 ~ 38916360 (-) True LOC120558769
XM_039799720.1 mRNA downstream 552651 38538673 ~ 38567635 (-) True LOC120558637
XM_039799719.1 mRNA downstream 589223 38508492 ~ 38531063 (-) True pcsk1nl
XM_039800481.1 mRNA downstream 767733 38343487 ~ 38352553 (-) True LOC120559059
XM_039800480.1 mRNA downstream 783380 38329266 ~ 38336906 (-) True LOC120559058
XM_039800156.1 mRNA upstream 212149 39333262 ~ 39348187 (-) True LOC120558856
XM_039799446.1 mRNA upstream 345113 39466226 ~ 39628477 (-) True plxna3
XM_039799936.1 mRNA upstream 918872 40039985 ~ 40132853 (-) True gripap1
XM_039799937.1 mRNA upstream 918872 40039985 ~ 40132852 (-) False gripap1
XM_039799943.1 mRNA upstream 1130443 40251556 ~ 40254265 (-) True LOC120558739
TU75903 other downstream 163086 38955694 ~ 38957200 (-) True LOC120558774
XR_005639179.1 other downstream 203926 38913720 ~ 38916360 (-) False LOC120558769
TU75943 other downstream 217318 38902484 ~ 38902968 (-) True G56645
TU75889 other downstream 315098 38794972 ~ 38805188 (-) False G56600
TU75873 other upstream 77625 39198738 ~ 39202426 (-) False G56598
TU75880 other upstream 77625 39198738 ~ 39202426 (-) False G56598
TU75886 other upstream 116531 39237644 ~ 39242738 (-) False G56599
TU76064 other upstream 276652 39397765 ~ 39459874 (-) False G56718
TU76067 other upstream 388439 39509552 ~ 39534640 (-) False plxna3

Expression Profile