RNA id: TU76077



Basic Information


Item Value
RNA id TU76077
length 263
lncRNA type intronic
GC content 0.49
exon number 2
gene id G56727
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39599878 ~ 39604156 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtgtttctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtgtctgtctgtgtctgtgtctgtgtccctttgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU76087 lncRNA downstream 19569 39531690 ~ 39580309 (-) False G56734
TU76093 lncRNA downstream 19569 39531690 ~ 39580309 (-) False G56734
TU76074 lncRNA downstream 28721 39561896 ~ 39571157 (-) True G56724
TU76095 lncRNA downstream 31514 39533449 ~ 39568364 (-) False G56734
TU76102 lncRNA downstream 35385 39531151 ~ 39564493 (-) False G56734
TU76121 lncRNA upstream 208 39604364 ~ 39616007 (-) True G56746
TU76125 lncRNA upstream 13833 39617989 ~ 39764768 (-) False G56747
TU76131 lncRNA upstream 38688 39642844 ~ 39643225 (-) True G56752
TU76142 lncRNA upstream 56845 39661001 ~ 39698670 (-) True G56761
TU76152 lncRNA upstream 81246 39685402 ~ 39696697 (-) False G56766
XM_039800156.1 mRNA downstream 251691 39333262 ~ 39348187 (-) True LOC120558856
XM_039799997.1 mRNA downstream 683518 38913720 ~ 38916360 (-) True LOC120558769
XM_039799720.1 mRNA downstream 1032243 38538673 ~ 38567635 (-) True LOC120558637
XM_039799719.1 mRNA downstream 1068815 38508492 ~ 38531063 (-) True pcsk1nl
XM_039800481.1 mRNA downstream 1247325 38343487 ~ 38352553 (-) True LOC120559059
XM_039799936.1 mRNA upstream 435829 40039985 ~ 40132853 (-) True gripap1
XM_039799937.1 mRNA upstream 435829 40039985 ~ 40132852 (-) False gripap1
XM_039799943.1 mRNA upstream 647400 40251556 ~ 40254265 (-) True LOC120558739
XM_039800490.1 mRNA upstream 931916 40536072 ~ 40566494 (-) True LOC120559070
XM_039801032.1 mRNA upstream 976515 40580671 ~ 40594368 (-) True LOC120559367
TU76067 other downstream 65238 39509552 ~ 39534640 (-) False plxna3
TU76064 other downstream 140004 39397765 ~ 39459874 (-) False G56718
TU75886 other downstream 357140 39237644 ~ 39242738 (-) False G56599
TU75873 other downstream 397452 39198738 ~ 39202426 (-) False G56598
TU76679 other upstream 1056869 40661025 ~ 40661886 (-) False LOC120559369
TU76612 other upstream 1229942 40834098 ~ 40903924 (-) True G57041
TU76607 other upstream 1273726 40877882 ~ 40884606 (-) True G57036
unassigned_transcript_237 other upstream 1336698 40940854 ~ 40940926 (-) True trnak-uuu_8
unassigned_transcript_238 other upstream 1341299 40945455 ~ 40945527 (-) True trnak-uuu_9

Expression Profile