RNA id: TU76091



Basic Information


Item Value
RNA id TU76091
length 665
lncRNA type sense_over
GC content 0.50
exon number 2
gene id G56734
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39433236 ~ 39751148 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gagtgtgtctgtcaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacatacagacacacacacacacacacagagacacacacacacacacacacacacacacacagagacacacacacacagagacacacacacacacacacacacacacagagacacacacacacacagagagacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacagacacagacacacacacacagagacacacacagagacacacacacacagacacacacacacagacacacacagacacacacacacacagagacacacacagagacacacacagacacacacagacacacacacacacacagacacaaacacgcacagacacacacagacacacacgcacacagacacacacagacacaaacacgcacagagacacacacagagacacacacagacacacagagacacacacagacacagagacacacagacacacacacacatagacacacagacacacacagacacacacaga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU76116 lncRNA downstream 15602 39515292 ~ 39516088 (-) True G56741
TU76053 lncRNA downstream 18410 39417029 ~ 39513280 (-) False G56718
TU76057 lncRNA downstream 18566 39389524 ~ 39513124 (-) False G56718
TU76069 lncRNA upstream 3929 39559926 ~ 39614237 (-) False G56721
TU76074 lncRNA upstream 5899 39561896 ~ 39571157 (-) True G56724
TU76075 lncRNA upstream 43393 39599390 ~ 39604614 (-) True G56725
TU76077 lncRNA upstream 43881 39599878 ~ 39604156 (-) True G56727
TU76122 lncRNA upstream 44338 39600335 ~ 39616007 (-) False G56746
XM_039800156.1 mRNA downstream 183503 39333262 ~ 39348187 (-) True LOC120558856
XM_039799997.1 mRNA downstream 615330 38913720 ~ 38916360 (-) True LOC120558769
XM_039799720.1 mRNA downstream 964055 38538673 ~ 38567635 (-) True LOC120558637
XM_039799719.1 mRNA downstream 1000627 38508492 ~ 38531063 (-) True pcsk1nl
XM_039800481.1 mRNA downstream 1179137 38343487 ~ 38352553 (-) True LOC120559059
XM_039799936.1 mRNA upstream 483988 40039985 ~ 40132853 (-) True gripap1
XM_039799937.1 mRNA upstream 483988 40039985 ~ 40132852 (-) False gripap1
XM_039799943.1 mRNA upstream 695559 40251556 ~ 40254265 (-) True LOC120558739
XM_039800490.1 mRNA upstream 980075 40536072 ~ 40566494 (-) True LOC120559070
XM_039801032.1 mRNA upstream 1024674 40580671 ~ 40594368 (-) True LOC120559367
TU76064 other downstream 71816 39397765 ~ 39459874 (-) False G56718
TU75886 other downstream 288952 39237644 ~ 39242738 (-) False G56599
TU75873 other downstream 329264 39198738 ~ 39202426 (-) False G56598
TU75880 other downstream 329264 39198738 ~ 39202426 (-) False G56598
TU75903 other downstream 574490 38955694 ~ 38957200 (-) True LOC120558774
TU76679 other upstream 1105028 40661025 ~ 40661886 (-) False LOC120559369
TU76612 other upstream 1278101 40834098 ~ 40903924 (-) True G57041
TU76607 other upstream 1321885 40877882 ~ 40884606 (-) True G57036
unassigned_transcript_237 other upstream 1384857 40940854 ~ 40940926 (-) True trnak-uuu_8
unassigned_transcript_238 other upstream 1389458 40945455 ~ 40945527 (-) True trnak-uuu_9

Expression Profile