RNA id: TU76103



Basic Information


Item Value
RNA id TU76103
length 364
lncRNA type sense_over
GC content 0.49
exon number 3
gene id G56734
representative False

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39433236 ~ 39751148 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agacacacacacacacagagacacacacacacagagacacagacacacacagacacacacacacagacacacacacacagacatacacacacacacacacacacagacagacatacacacacacacatacatacacacatacacacacacacacagagacacacacacacacacagagacacacacacacacacacacagagacacacacacacagagacacacacacacacacagacacacacagagagacacacacagagacacacacacagacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacaccc

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU76116 lncRNA downstream 15063 39515292 ~ 39516088 (-) True G56741
TU76053 lncRNA downstream 17871 39417029 ~ 39513280 (-) False G56718
TU76057 lncRNA downstream 18027 39389524 ~ 39513124 (-) False G56718
TU76075 lncRNA upstream 34897 39599390 ~ 39604614 (-) True G56725
TU76077 lncRNA upstream 35385 39599878 ~ 39604156 (-) True G56727
TU76122 lncRNA upstream 35842 39600335 ~ 39616007 (-) False G56746
TU76121 lncRNA upstream 39871 39604364 ~ 39616007 (-) True G56746
TU76125 lncRNA upstream 53496 39617989 ~ 39764768 (-) False G56747
XM_039800156.1 mRNA downstream 182964 39333262 ~ 39348187 (-) True LOC120558856
XM_039799997.1 mRNA downstream 614791 38913720 ~ 38916360 (-) True LOC120558769
XM_039799720.1 mRNA downstream 963516 38538673 ~ 38567635 (-) True LOC120558637
XM_039799719.1 mRNA downstream 1000088 38508492 ~ 38531063 (-) True pcsk1nl
XM_039800481.1 mRNA downstream 1178598 38343487 ~ 38352553 (-) True LOC120559059
XM_039799936.1 mRNA upstream 475492 40039985 ~ 40132853 (-) True gripap1
XM_039799937.1 mRNA upstream 475492 40039985 ~ 40132852 (-) False gripap1
XM_039799943.1 mRNA upstream 687063 40251556 ~ 40254265 (-) True LOC120558739
XM_039800490.1 mRNA upstream 971579 40536072 ~ 40566494 (-) True LOC120559070
XM_039801032.1 mRNA upstream 1016178 40580671 ~ 40594368 (-) True LOC120559367
TU76064 other downstream 71277 39397765 ~ 39459874 (-) False G56718
TU75886 other downstream 288413 39237644 ~ 39242738 (-) False G56599
TU75873 other downstream 328725 39198738 ~ 39202426 (-) False G56598
TU75880 other downstream 328725 39198738 ~ 39202426 (-) False G56598
TU75903 other downstream 573951 38955694 ~ 38957200 (-) True LOC120558774
TU76679 other upstream 1096532 40661025 ~ 40661886 (-) False LOC120559369
TU76612 other upstream 1269605 40834098 ~ 40903924 (-) True G57041
TU76607 other upstream 1313389 40877882 ~ 40884606 (-) True G57036
unassigned_transcript_237 other upstream 1376361 40940854 ~ 40940926 (-) True trnak-uuu_8
unassigned_transcript_238 other upstream 1380962 40945455 ~ 40945527 (-) True trnak-uuu_9

Expression Profile


TU76103 Expression in all Baseline Samples

Bar chart with 13 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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TU76103 Expression in each Bioproject

Bar chart with 5 bars.
TU76103 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.