RNA id: TU76556



Basic Information


Item Value
RNA id TU76556
length 292
lncRNA type sense_over
GC content 0.46
exon number 4
gene id G57014
representative False

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 40156597 ~ 40333577 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ggtgactagagtctctcaaaatctgatgaagatcttttaaactgacctttgttgatctgaaatgaagacagattcaggaactgtatacacacacacagacacacacagacacacacacagagacacacacacacacacacacacacacacacatagacacacacacacagagagacacacacacacagacacacacagagacacacagacacacacacacagacacacacagacacacacacacagagacacacacacacacacacacacacacacacacacagacacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU76204 lncRNA downstream 134283 40026319 ~ 40026739 (-) True G56809
TU76178 lncRNA downstream 297345 39855204 ~ 39863677 (-) True G56785
TU76177 lncRNA downstream 301916 39851153 ~ 39859106 (-) True G56784
TU76124 lncRNA downstream 396254 39746500 ~ 39764768 (-) False G56747
TU76625 lncRNA upstream 6903 40340480 ~ 40400472 (-) True G57054
TU76616 lncRNA upstream 36610 40370187 ~ 40370815 (-) True G57045
TU76628 lncRNA upstream 39117 40372694 ~ 40375773 (-) True G57057
TU76601 lncRNA upstream 52786 40386363 ~ 40459393 (-) False G57032
TU76602 lncRNA upstream 52786 40386363 ~ 40459393 (-) False G57032
XM_039799936.1 mRNA downstream 28169 40039985 ~ 40132853 (-) True gripap1
XM_039799937.1 mRNA downstream 28170 40039985 ~ 40132852 (-) False gripap1
XM_039799446.1 mRNA downstream 532545 39466226 ~ 39628477 (-) True plxna3
XM_039800156.1 mRNA downstream 812835 39333262 ~ 39348187 (-) True LOC120558856
XM_039799997.1 mRNA downstream 1244662 38913720 ~ 38916360 (-) True LOC120558769
XM_039800490.1 mRNA upstream 202495 40536072 ~ 40566494 (-) True LOC120559070
XM_039801032.1 mRNA upstream 247094 40580671 ~ 40594368 (-) True LOC120559367
XM_039801036.1 mRNA upstream 265228 40598805 ~ 40602090 (-) True LOC120559370
XM_039801033.1 mRNA upstream 304114 40637691 ~ 40647772 (-) True LOC120559368
XM_039801034.1 mRNA upstream 304114 40637691 ~ 40647757 (-) False LOC120559368
TU76071 other downstream 546785 39550498 ~ 39614237 (-) True G56721
TU76067 other downstream 626382 39509552 ~ 39534640 (-) False plxna3
TU76064 other downstream 701148 39397765 ~ 39459874 (-) False G56718
TU75886 other downstream 918284 39237644 ~ 39242738 (-) False G56599
TU75880 other downstream 958596 39198738 ~ 39202426 (-) False G56598
TU76679 other upstream 327448 40661025 ~ 40661886 (-) False LOC120559369
TU76612 other upstream 500521 40834098 ~ 40903924 (-) True G57041
TU76607 other upstream 544305 40877882 ~ 40884606 (-) True G57036
unassigned_transcript_237 other upstream 607277 40940854 ~ 40940926 (-) True trnak-uuu_8
unassigned_transcript_238 other upstream 611878 40945455 ~ 40945527 (-) True trnak-uuu_9

Expression Profile